STRINGSTRING
Nop9 Nop9 ENSDORP00000026414 ENSDORP00000026414 Noc4l Noc4l Fam207a Fam207a Tsr1 Tsr1 Riok2 Riok2 Riok3 Riok3 Bysl Bysl Ltv1 Ltv1 Riok1 Riok1 Rrp1b Rrp1b Ftsj3 Ftsj3 Rrp1 Rrp1 Nop14 Nop14 Nob1 Nob1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Nop9Nucleolar protein 9. (639 aa)
ENSDORP00000026414annotation not available (722 aa)
Noc4lNucleolar complex protein 4 homolog. (518 aa)
Fam207aProtein FAM207A. (172 aa)
Tsr1pre-rRNA-processing protein TSR1 homolog. (803 aa)
Riok2Serine/threonine-protein kinase RIO2 isoform X1. (538 aa)
Riok3Serine/threonine-protein kinase RIO3; Involved in regulation of type I interferon (IFN)-dependent immune response which plays a critical role in the innate immune response against DNA and RNA viruses. (519 aa)
ByslBystin. (436 aa)
Ltv1Protein LTV1 homolog. (469 aa)
Riok1Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (570 aa)
Rrp1bRibosomal RNA processing protein 1 homolog B isoform X1. (662 aa)
Ftsj3pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (832 aa)
Rrp1Ribosomal RNA processing protein 1 homolog A. (412 aa)
Nop14Nucleolar protein 14. (815 aa)
Nob1RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. (408 aa)
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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