29 items (Dipodomys ordii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Krit1	Krev interaction trapped protein 1 isoform X1. (736 aa)
	LOC105984826	Guanine nucleotide-binding protein subunit beta-2-like 1 pseudogene. (259 aa)
	Gata3	Trans-acting T-cell-specific transcription factor GATA-3 isoform X1. (444 aa)
	Llgl2	Lethal(2) giant larvae protein homolog 2 isoform X1. (1029 aa)
	Kif3a	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (726 aa)
	Rictor	Rapamycin-insensitive companion of mTOR. (1631 aa)
	Rap1b	Ras-related protein Rap-1b. (184 aa)
	Kank1	KN motif and ankyrin repeat domain-containing protein 1. (1342 aa)
	Bcas3	Breast carcinoma-amplified sequence 3 isoform X4. (928 aa)
	Llgl1	Lethal(2) giant larvae protein homolog 1 isoform X1. (1062 aa)
	Gsn	Gelsolin isoform X2. (568 aa)
	Rufy3	Protein RUFY3. (453 aa)
	Fam49b	Protein FAM49B isoform X1. (324 aa)
	Dock8	Dedicator of cytokinesis protein 8 isoform X1; Belongs to the DOCK family. (2099 aa)
	Shtn1	Shootin-1. (627 aa)
	LOC106001701	Ankyrin repeat and fibronectin type-III domain-containing protein 1. (743 aa)
	Abl2	Tyrosine-protein kinase. (1132 aa)
	Arfgef1	Brefeldin A-inhibited guanine nucleotide-exchange protein 1. (1778 aa)
	Wdpcp	WD repeat-containing and planar cell polarity effector protein fritz homolog. (718 aa)
	Kif20b	Kinesin-like protein KIF20B isoform X2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1771 aa)
	Rack1	Guanine nucleotide-binding protein subunit beta-2-like 1. (317 aa)
	Flot2	Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily. (428 aa)
	Ptk2b	Protein-tyrosine kinase 2-beta isoform X1; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1009 aa)
	Cfl1	Cofilin-1; Belongs to the actin-binding proteins ADF family. (168 aa)
	ENSDORP00000026600	annotation not available (64 aa)
	ENSDORP00000026363	annotation not available (164 aa)
	Ankfn1	Uncharacterized protein LOC106001690. (401 aa)
	Ripor2	Protein FAM65B isoform X2. (1097 aa)
	Tek	Angiopoietin-1 receptor isoform X1. (1125 aa)

Your Current Organism:

Dipodomys ordii

NCBI taxonomy Id: 10020
Other names: D. ordii

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Abl2	Ptk2b	ENSDORP00000011753	ENSDORP00000009589	Tyrosine-protein kinase.	Protein-tyrosine kinase 2-beta isoform X1; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.587
Abl2	Rictor	ENSDORP00000011753	ENSDORP00000018919	Tyrosine-protein kinase.	Rapamycin-insensitive companion of mTOR.	0.480
Ankfn1	LOC106001701	ENSDORP00000026011	ENSDORP00000007335	Uncharacterized protein LOC106001690.	Ankyrin repeat and fibronectin type-III domain-containing protein 1.	0.899
Arfgef1	ENSDORP00000026363	ENSDORP00000010985	ENSDORP00000026363	Brefeldin A-inhibited guanine nucleotide-exchange protein 1.	annotation not available	0.428
Arfgef1	Rap1b	ENSDORP00000010985	ENSDORP00000018744	Brefeldin A-inhibited guanine nucleotide-exchange protein 1.	Ras-related protein Rap-1b.	0.428
Cfl1	Gsn	ENSDORP00000009343	ENSDORP00000014469	Cofilin-1; Belongs to the actin-binding proteins ADF family.	Gelsolin isoform X2.	0.571
Dock8	ENSDORP00000026363	ENSDORP00000006757	ENSDORP00000026363	Dedicator of cytokinesis protein 8 isoform X1; Belongs to the DOCK family.	annotation not available	0.455
Dock8	Kank1	ENSDORP00000006757	ENSDORP00000017654	Dedicator of cytokinesis protein 8 isoform X1; Belongs to the DOCK family.	KN motif and ankyrin repeat domain-containing protein 1.	0.538
Dock8	Rap1b	ENSDORP00000006757	ENSDORP00000018744	Dedicator of cytokinesis protein 8 isoform X1; Belongs to the DOCK family.	Ras-related protein Rap-1b.	0.455
ENSDORP00000026363	Arfgef1	ENSDORP00000026363	ENSDORP00000010985	annotation not available	Brefeldin A-inhibited guanine nucleotide-exchange protein 1.	0.428
ENSDORP00000026363	Dock8	ENSDORP00000026363	ENSDORP00000006757	annotation not available	Dedicator of cytokinesis protein 8 isoform X1; Belongs to the DOCK family.	0.455
ENSDORP00000026363	Krit1	ENSDORP00000026363	ENSDORP00000023796	annotation not available	Krev interaction trapped protein 1 isoform X1.	0.981
ENSDORP00000026363	Ptk2b	ENSDORP00000026363	ENSDORP00000009589	annotation not available	Protein-tyrosine kinase 2-beta isoform X1; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.500
ENSDORP00000026363	Tek	ENSDORP00000026363	ENSDORP00000023908	annotation not available	Angiopoietin-1 receptor isoform X1.	0.457
ENSDORP00000026600	Ptk2b	ENSDORP00000026600	ENSDORP00000009589	annotation not available	Protein-tyrosine kinase 2-beta isoform X1; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.587
ENSDORP00000026600	Rictor	ENSDORP00000026600	ENSDORP00000018919	annotation not available	Rapamycin-insensitive companion of mTOR.	0.480
Gsn	Cfl1	ENSDORP00000014469	ENSDORP00000009343	Gelsolin isoform X2.	Cofilin-1; Belongs to the actin-binding proteins ADF family.	0.571
Gsn	Ripor2	ENSDORP00000014469	ENSDORP00000025677	Gelsolin isoform X2.	Protein FAM65B isoform X2.	0.488
Kank1	Dock8	ENSDORP00000017654	ENSDORP00000006757	KN motif and ankyrin repeat domain-containing protein 1.	Dedicator of cytokinesis protein 8 isoform X1; Belongs to the DOCK family.	0.538
Kif20b	Kif3a	ENSDORP00000002386	ENSDORP00000020530	Kinesin-like protein KIF20B isoform X2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.441