12 items (Dipodomys ordii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Fam83a	Protein FAM83A. (427 aa)
	Fbxl2	F-box/LRR-repeat protein 2. (125 aa)
	Fbxl20	F-box/LRR-repeat protein 20 isoform X1. (436 aa)
	Dnm2	Dynamin-2 isoform X5; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (870 aa)
	Dab2ip	Disabled homolog 2-interacting protein isoform X1. (1166 aa)
	Cbl	E3 ubiquitin-protein ligase CBL. (51 aa)
	Pik3r1	Phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1. (724 aa)
	Nlrc3	Protein NLRC3 isoform X1. (1111 aa)
	Ptpn13	Tyrosine-protein phosphatase non-receptor type 13. (2409 aa)
	Xbp1	LOW QUALITY PROTEIN: X-box-binding protein 1. (275 aa)
	Mast3	Microtubule associated serine/threonine kinase 3. (71 aa)
	Pik3ap1	Phosphoinositide 3-kinase adapter protein 1. (806 aa)

Your Current Organism:

Dipodomys ordii

NCBI taxonomy Id: 10020
Other names: D. ordii

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cbl	Mast3	ENSDORP00000020259	ENSDORP00000003965	E3 ubiquitin-protein ligase CBL.	Microtubule associated serine/threonine kinase 3.	0.975
Cbl	Pik3r1	ENSDORP00000020259	ENSDORP00000020150	E3 ubiquitin-protein ligase CBL.	Phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1.	0.995
Cbl	Ptpn13	ENSDORP00000020259	ENSDORP00000009163	E3 ubiquitin-protein ligase CBL.	Tyrosine-protein phosphatase non-receptor type 13.	0.552
Fbxl2	Mast3	ENSDORP00000023739	ENSDORP00000003965	F-box/LRR-repeat protein 2.	Microtubule associated serine/threonine kinase 3.	0.508
Mast3	Cbl	ENSDORP00000003965	ENSDORP00000020259	Microtubule associated serine/threonine kinase 3.	E3 ubiquitin-protein ligase CBL.	0.975
Mast3	Fbxl2	ENSDORP00000003965	ENSDORP00000023739	Microtubule associated serine/threonine kinase 3.	F-box/LRR-repeat protein 2.	0.508
Mast3	Pik3ap1	ENSDORP00000003965	ENSDORP00000003444	Microtubule associated serine/threonine kinase 3.	Phosphoinositide 3-kinase adapter protein 1.	0.859
Mast3	Pik3r1	ENSDORP00000003965	ENSDORP00000020150	Microtubule associated serine/threonine kinase 3.	Phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1.	0.992
Mast3	Ptpn13	ENSDORP00000003965	ENSDORP00000009163	Microtubule associated serine/threonine kinase 3.	Tyrosine-protein phosphatase non-receptor type 13.	0.435
Mast3	Xbp1	ENSDORP00000003965	ENSDORP00000004563	Microtubule associated serine/threonine kinase 3.	LOW QUALITY PROTEIN: X-box-binding protein 1.	0.538
Pik3ap1	Mast3	ENSDORP00000003444	ENSDORP00000003965	Phosphoinositide 3-kinase adapter protein 1.	Microtubule associated serine/threonine kinase 3.	0.859
Pik3ap1	Pik3r1	ENSDORP00000003444	ENSDORP00000020150	Phosphoinositide 3-kinase adapter protein 1.	Phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1.	0.877
Pik3r1	Cbl	ENSDORP00000020150	ENSDORP00000020259	Phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1.	E3 ubiquitin-protein ligase CBL.	0.995
Pik3r1	Mast3	ENSDORP00000020150	ENSDORP00000003965	Phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1.	Microtubule associated serine/threonine kinase 3.	0.992
Pik3r1	Pik3ap1	ENSDORP00000020150	ENSDORP00000003444	Phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1.	Phosphoinositide 3-kinase adapter protein 1.	0.877
Pik3r1	Ptpn13	ENSDORP00000020150	ENSDORP00000009163	Phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1.	Tyrosine-protein phosphatase non-receptor type 13.	0.429
Ptpn13	Cbl	ENSDORP00000009163	ENSDORP00000020259	Tyrosine-protein phosphatase non-receptor type 13.	E3 ubiquitin-protein ligase CBL.	0.552
Ptpn13	Mast3	ENSDORP00000009163	ENSDORP00000003965	Tyrosine-protein phosphatase non-receptor type 13.	Microtubule associated serine/threonine kinase 3.	0.435
Ptpn13	Pik3r1	ENSDORP00000009163	ENSDORP00000020150	Tyrosine-protein phosphatase non-receptor type 13.	Phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1.	0.429
Xbp1	Mast3	ENSDORP00000004563	ENSDORP00000003965	LOW QUALITY PROTEIN: X-box-binding protein 1.	Microtubule associated serine/threonine kinase 3.	0.538