STRINGSTRING
Eif2ak3 Eif2ak3 Man1b1 Man1b1 Calr Calr Asgr2 Asgr2 Rhbdd1 Rhbdd1 Herpud1 Herpud1 Edem2 Edem2 Syvn1 Syvn1 Edem1 Edem1 Edem3 Edem3 Derl1 Derl1 Ern2 Ern2 Canx Canx Sec61b Sec61b
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Eif2ak3Eukaryotic translation initiation factor 2-alpha kinase 3. (1025 aa)
Man1b1alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (654 aa)
CalrCalreticulin. (417 aa)
Asgr2Asialoglycoprotein receptor 2 isoform X1. (301 aa)
Rhbdd1Rhomboid-related protein 4. (316 aa)
Herpud1Homocysteine inducible ER protein with ubiquitin like domain 1. (389 aa)
Edem2alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (507 aa)
Syvn1E3 ubiquitin-protein ligase synoviolin. (607 aa)
Edem1alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (636 aa)
Edem3alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (949 aa)
Derl1Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. (213 aa)
Ern2Serine/threonine-protein kinase/endoribonuclease IRE2. (981 aa)
CanxCalnexin. (560 aa)
Sec61bProtein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (96 aa)
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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