STRINGSTRING
Git2 Git2 Pirt Pirt Thbs1 Thbs1 Cacna1a Cacna1a Crhr1 Crhr1 Lpar5 Lpar5 P2rx3 P2rx3 Kcnip3 Kcnip3 Vwa1 Vwa1 Scn9a Scn9a Capn2 Capn2 Tspo Tspo Grik1 Grik1 Trpv1 Trpv1 Akt1 Akt1 Ntrk1 Ntrk1 Thbs4 Thbs4 Mtor Mtor Cacna1e Cacna1e
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Git2ARF GTPase-activating protein GIT2 isoform X1. (757 aa)
PirtPhosphoinositide-interacting protein. (135 aa)
Thbs1Thrombospondin-1. (1173 aa)
Cacna1aVoltage-dependent P/Q-type calcium channel subunit alpha-1A. (2254 aa)
Crhr1Corticotropin-releasing factor receptor 1 isoform X1; Belongs to the G-protein coupled receptor 2 family. (415 aa)
Lpar5Lysophosphatidic acid receptor 5; Belongs to the G-protein coupled receptor 1 family. (373 aa)
P2rx3P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. (397 aa)
Kcnip3Calsenilin isoform X1. (261 aa)
Vwa1Von Willebrand factor A domain-containing protein 1. (277 aa)
Scn9aSodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. (2006 aa)
Capn2Calpain-2 catalytic subunit; Belongs to the peptidase C2 family. (700 aa)
TspoTranslocator protein. (168 aa)
Grik1Glutamate receptor ionotropic, kainate 1 isoform X1. (926 aa)
Trpv1Transient receptor potential cation channel subfamily V member 1 isoform X1; Belongs to the transient receptor (TC 1.A.4) family. (841 aa)
Akt1Non-specific serine/threonine protein kinase. (188 aa)
Ntrk1Tyrosine-protein kinase receptor. (799 aa)
Thbs4Thrombospondin-4. (983 aa)
MtorSerine/threonine-protein kinase mTOR; Belongs to the PI3/PI4-kinase family. (2457 aa)
Cacna1eVoltage-dependent R-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1E gives rise to R-type calcium currents. (2325 aa)
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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