STRINGSTRING
Wnt5a Wnt5a Nf1 Nf1 Prop1 Prop1 Pten Pten Gak Gak Smo Smo Gsx2 Gsx2 Hesx1 Hesx1 Ift88 Ift88 Otx2 Otx2 Otx1 Otx1 Fgf8 Fgf8 Duox2 Duox2 Hhex Hhex Uchl5 Uchl5 LOC105988171 LOC105988171
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Wnt5aProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (380 aa)
Nf1Neurofibromin isoform X1. (2841 aa)
Prop1Homeobox protein prophet of Pit-1. (226 aa)
PtenPhosphatase and tensin homolog. (396 aa)
Gakcyclin-G-associated kinase isoform X2. (1268 aa)
SmoSmoothened homolog; Belongs to the G-protein coupled receptor Fz/Smo family. (788 aa)
Gsx2LOW QUALITY PROTEIN: GS homeobox 2. (303 aa)
Hesx1Homeobox expressed in ES cells 1. (185 aa)
Ift88Intraflagellar transport protein 88 homolog isoform X1. (825 aa)
Otx2Homeobox protein OTX2 isoform X1. (297 aa)
Otx1Homeobox protein OTX1. (354 aa)
Fgf8Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (233 aa)
Duox2LOW QUALITY PROTEIN: dual oxidase 2. (1509 aa)
HhexHematopoietically-expressed homeobox protein HHEX. (272 aa)
Uchl5Ubiquitin carboxyl-terminal hydrolase. (293 aa)
LOC105988171Homeobox protein OTX2 pseudogene. (269 aa)
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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