27 items (Dipodomys ordii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Kcnj3	G protein-activated inward rectifier potassium channel 1 isoform X1. (502 aa)
	Cadps2	Calcium-dependent secretion activator 2. (1249 aa)
	Pfn1	Profilin; Belongs to the profilin family. (140 aa)
	Grin1	LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 1. (926 aa)
	Snap91-2	Clathrin coat assembly protein AP180 isoform X3. (120 aa)
	Cbln1	Cerebellin-1. (193 aa)
	Pclo	Protein piccolo. (4558 aa)
	ENSDORP00000027710	annotation not available (102 aa)
	Gria3	Glutamate receptor 3 isoform X2. (894 aa)
	Slc1a6	Amino acid transporter. (544 aa)
	Kcnh1	Potassium voltage-gated channel subfamily H member 1 isoform X1. (990 aa)
	Unc13c	Protein unc-13 homolog C. (2207 aa)
	Cntn6	Contactin-6. (1028 aa)
	Picalm	Phosphatidylinositol-binding clathrin assembly protein. (673 aa)
	Cadm3	Cell adhesion molecule 3 isoform X2. (396 aa)
	Slc16a3	Monocarboxylate transporter 4. (461 aa)
	Grin2a	Glutamate receptor ionotropic, NMDA 2A. (1301 aa)
	Grid2	Glutamate receptor ionotropic, delta-2 isoform X1. (977 aa)
	Synj1	Synaptojanin-1 isoform X2. (693 aa)
	Plcb4	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. (1175 aa)
	Calb2	Calretinin isoform X1. (271 aa)
	Scn8a	Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. (1982 aa)
	Sptbn2	Spectrin beta chain; Belongs to the spectrin family. (2383 aa)
	P2rx6	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. (396 aa)
	Ppp3r1	Calcineurin subunit B type 1. (169 aa)
	Slc6a9	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (664 aa)
	Kcnj9	G protein-activated inward rectifier potassium channel 3. (393 aa)

Your Current Organism:

Dipodomys ordii

NCBI taxonomy Id: 10020
Other names: D. ordii

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Calb2	Cbln1	ENSDORP00000015093	ENSDORP00000024500	Calretinin isoform X1.	Cerebellin-1.	0.449
Calb2	Grin1	ENSDORP00000015093	ENSDORP00000022623	Calretinin isoform X1.	LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 1.	0.650
Calb2	Kcnh1	ENSDORP00000015093	ENSDORP00000005278	Calretinin isoform X1.	Potassium voltage-gated channel subfamily H member 1 isoform X1.	0.559
Calb2	Ppp3r1	ENSDORP00000015093	ENSDORP00000019019	Calretinin isoform X1.	Calcineurin subunit B type 1.	0.486
Cbln1	Calb2	ENSDORP00000024500	ENSDORP00000015093	Cerebellin-1.	Calretinin isoform X1.	0.449
Cbln1	Grid2	ENSDORP00000024500	ENSDORP00000011007	Cerebellin-1.	Glutamate receptor ionotropic, delta-2 isoform X1.	0.694
ENSDORP00000027710	Plcb4	ENSDORP00000027710	ENSDORP00000014385	annotation not available	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.	0.759
ENSDORP00000027710	Synj1	ENSDORP00000027710	ENSDORP00000013867	annotation not available	Synaptojanin-1 isoform X2.	0.723
Gria3	Grid2	ENSDORP00000003261	ENSDORP00000011007	Glutamate receptor 3 isoform X2.	Glutamate receptor ionotropic, delta-2 isoform X1.	0.566
Gria3	Grin1	ENSDORP00000003261	ENSDORP00000022623	Glutamate receptor 3 isoform X2.	LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 1.	0.712
Gria3	Grin2a	ENSDORP00000003261	ENSDORP00000010822	Glutamate receptor 3 isoform X2.	Glutamate receptor ionotropic, NMDA 2A.	0.707
Grid2	Cbln1	ENSDORP00000011007	ENSDORP00000024500	Glutamate receptor ionotropic, delta-2 isoform X1.	Cerebellin-1.	0.694
Grid2	Gria3	ENSDORP00000011007	ENSDORP00000003261	Glutamate receptor ionotropic, delta-2 isoform X1.	Glutamate receptor 3 isoform X2.	0.566
Grid2	Grin1	ENSDORP00000011007	ENSDORP00000022623	Glutamate receptor ionotropic, delta-2 isoform X1.	LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 1.	0.647
Grid2	Grin2a	ENSDORP00000011007	ENSDORP00000010822	Glutamate receptor ionotropic, delta-2 isoform X1.	Glutamate receptor ionotropic, NMDA 2A.	0.681
Grid2	Plcb4	ENSDORP00000011007	ENSDORP00000014385	Glutamate receptor ionotropic, delta-2 isoform X1.	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.	0.485
Grin1	Calb2	ENSDORP00000022623	ENSDORP00000015093	LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 1.	Calretinin isoform X1.	0.650
Grin1	Gria3	ENSDORP00000022623	ENSDORP00000003261	LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 1.	Glutamate receptor 3 isoform X2.	0.712
Grin1	Grid2	ENSDORP00000022623	ENSDORP00000011007	LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 1.	Glutamate receptor ionotropic, delta-2 isoform X1.	0.647
Grin1	Grin2a	ENSDORP00000022623	ENSDORP00000010822	LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 1.	Glutamate receptor ionotropic, NMDA 2A.	0.998