16 items (Dipodomys ordii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Jak1	Tyrosine-protein kinase. (1155 aa)
	P4hb	Protein disulfide-isomerase. (485 aa)
	Hspd1	60 kDa heat shock protein, mitochondrial; Belongs to the chaperonin (HSP60) family. (573 aa)
	Atic	Bifunctional purine biosynthesis protein PURH. (592 aa)
	Atp5f1b	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. (529 aa)
	Gipc2	PDZ domain-containing protein GIPC2. (317 aa)
	Rad23b	UV excision repair protein RAD23 homolog B. (390 aa)
	Lsp1	Lymphocyte-specific protein 1 isoform X1. (82 aa)
	Stip1	Stress-induced-phosphoprotein 1. (546 aa)
	Hdgf	Hepatoma-derived growth factor isoform X2. (88 aa)
	Pdia3	Protein disulfide-isomerase. (505 aa)
	Gipc1	PDZ domain-containing protein GIPC1. (105 aa)
	Gipc3	PDZ domain-containing protein GIPC3. (272 aa)
	Crkl	Crk-like protein. (303 aa)
	ENSDORP00000024097	annotation not available (150 aa)
	Btk	Tyrosine-protein kinase. (659 aa)

Your Current Organism:

Dipodomys ordii

NCBI taxonomy Id: 10020
Other names: D. ordii

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Atp5f1b	ENSDORP00000024097	ENSDORP00000008682	ENSDORP00000024097	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	annotation not available	0.773
Atp5f1b	Hspd1	ENSDORP00000008682	ENSDORP00000010402	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	60 kDa heat shock protein, mitochondrial; Belongs to the chaperonin (HSP60) family.	0.773
Atp5f1b	P4hb	ENSDORP00000008682	ENSDORP00000011088	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Protein disulfide-isomerase.	0.575
Atp5f1b	Pdia3	ENSDORP00000008682	ENSDORP00000013563	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Protein disulfide-isomerase.	0.433
Btk	Crkl	ENSDORP00000025516	ENSDORP00000021103	Tyrosine-protein kinase.	Crk-like protein.	0.598
Crkl	Btk	ENSDORP00000021103	ENSDORP00000025516	Crk-like protein.	Tyrosine-protein kinase.	0.598
Crkl	Jak1	ENSDORP00000021103	ENSDORP00000012658	Crk-like protein.	Tyrosine-protein kinase.	0.625
ENSDORP00000024097	Atp5f1b	ENSDORP00000024097	ENSDORP00000008682	annotation not available	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.773
ENSDORP00000024097	Stip1	ENSDORP00000024097	ENSDORP00000001508	annotation not available	Stress-induced-phosphoprotein 1.	0.714
Gipc1	Gipc2	ENSDORP00000014316	ENSDORP00000008137	PDZ domain-containing protein GIPC1.	PDZ domain-containing protein GIPC2.	0.471
Gipc2	Gipc1	ENSDORP00000008137	ENSDORP00000014316	PDZ domain-containing protein GIPC2.	PDZ domain-containing protein GIPC1.	0.471
Hspd1	Atp5f1b	ENSDORP00000010402	ENSDORP00000008682	60 kDa heat shock protein, mitochondrial; Belongs to the chaperonin (HSP60) family.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.773
Hspd1	Stip1	ENSDORP00000010402	ENSDORP00000001508	60 kDa heat shock protein, mitochondrial; Belongs to the chaperonin (HSP60) family.	Stress-induced-phosphoprotein 1.	0.714
Jak1	Crkl	ENSDORP00000012658	ENSDORP00000021103	Tyrosine-protein kinase.	Crk-like protein.	0.625
Jak1	Pdia3	ENSDORP00000012658	ENSDORP00000013563	Tyrosine-protein kinase.	Protein disulfide-isomerase.	0.425
P4hb	Atp5f1b	ENSDORP00000011088	ENSDORP00000008682	Protein disulfide-isomerase.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.575
P4hb	Pdia3	ENSDORP00000011088	ENSDORP00000013563	Protein disulfide-isomerase.	Protein disulfide-isomerase.	0.822
Pdia3	Atp5f1b	ENSDORP00000013563	ENSDORP00000008682	Protein disulfide-isomerase.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.433
Pdia3	Jak1	ENSDORP00000013563	ENSDORP00000012658	Protein disulfide-isomerase.	Tyrosine-protein kinase.	0.425
Pdia3	P4hb	ENSDORP00000013563	ENSDORP00000011088	Protein disulfide-isomerase.	Protein disulfide-isomerase.	0.822