STRINGSTRING
Usp13 Usp13 Cav1 Cav1 Rnf183 Rnf183 Agr2 Agr2 LOC105996454 LOC105996454 Ptpn2 Ptpn2 Bak1 Bak1 Eif2ak3 Eif2ak3 LOC105990085 LOC105990085 Sirt1 Sirt1 Pik3r1 Pik3r1 Rnf185 Rnf185 Bok Bok Atf6 Atf6 Bag6 Bag6 Ubqln2 Ubqln2 Bax Bax Nck1 Nck1 Tmem259 Tmem259 Ern1 Ern1 Nck2 Nck2 Tmem67 Tmem67 Xbp1 Xbp1 Serinc3 Serinc3 Bcap31 Bcap31 Herpud1 Herpud1 Rnft1 Rnft1 Sgta Sgta Rnft2 Rnft2 Tmem33 Tmem33
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Usp13Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (863 aa)
Cav1Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (178 aa)
Rnf183RING finger protein 183. (194 aa)
Agr2Anterior gradient protein 2 homolog. (192 aa)
LOC105996454Low affinity immunoglobulin gamma Fc region receptor II-like. (311 aa)
Ptpn2Tyrosine-protein phosphatase non-receptor type 2. (397 aa)
Bak1Bcl-2 homologous antagonist/killer. (211 aa)
Eif2ak3Eukaryotic translation initiation factor 2-alpha kinase 3. (1025 aa)
LOC105990085Tyrosine-protein phosphatase non-receptor type. (333 aa)
Sirt1NAD-dependent protein deacetylase sirtuin-1. (646 aa)
Pik3r1Phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1. (724 aa)
Rnf185E3 ubiquitin-protein ligase RNF185 isoform X1. (192 aa)
BokBcl-2-related ovarian killer protein. (138 aa)
Atf6Cyclic AMP-dependent transcription factor ATF-6 alpha isoform X1. (663 aa)
Bag6Large proline-rich protein BAG6 isoform X5. (1127 aa)
Ubqln2Ubiquilin-2. (629 aa)
BaxApoptosis regulator BAX. (143 aa)
Nck1Cytoplasmic protein. (377 aa)
Tmem259Membralin. (590 aa)
Ern1Serine/threonine-protein kinase/endoribonuclease IRE1. (406 aa)
Nck2Cytoplasmic protein. (380 aa)
Tmem67Meckelin isoform X1. (992 aa)
Xbp1LOW QUALITY PROTEIN: X-box-binding protein 1. (275 aa)
Serinc3Serine incorporator 3. (396 aa)
Bcap31B-cell receptor-associated protein 31. (246 aa)
Herpud1Homocysteine inducible ER protein with ubiquitin like domain 1. (389 aa)
Rnft1RING finger and transmembrane domain-containing protein 1. (399 aa)
SgtaSmall glutamine-rich tetratricopeptide repeat-containing protein alpha. (313 aa)
Rnft2RING finger and transmembrane domain-containing protein 2. (444 aa)
Tmem33Transmembrane protein 33 isoform X2. (246 aa)
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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