82 items (Dipodomys ordii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Sema4c	semaphorin-4C; Belongs to the semaphorin family. (831 aa)
	Exph5	Exophilin-5. (1812 aa)
	LOC105983195	UPF0183 protein C16orf70 homolog. (423 aa)
	Tmem163	Transmembrane protein 163. (233 aa)
	Dlg1	Disks large homolog 1; Belongs to the MAGUK family. (834 aa)
	Slc17a7	Vesicular glutamate transporter 1. (560 aa)
	Otof	Otoferlin isoform X1. (1998 aa)
	Prrt1	Proline-rich transmembrane protein 1. (306 aa)
	Rab3b	Ras-related protein Rab-3B. (219 aa)
	Wfs1	Wolframin. (885 aa)
	Scamp1	Secretory carrier-associated membrane protein. (338 aa)
	Slc10a4	Sodium/bile acid cotransporter 4. (238 aa)
	Dlg2	Disks large homolog 2 isoform X3. (870 aa)
	Slc30a3	Zinc transporter 3. (387 aa)
	Sgta	Small glutamine-rich tetratricopeptide repeat-containing protein alpha. (313 aa)
	Abcc8	ATP-binding cassette sub-family C member 8 isoform X1. (1582 aa)
	Syn2	Synapsin-2. (306 aa)
	Rab3a	Ras-related protein Rab-3A. (220 aa)
	Sv2b	Synaptic vesicle glycoprotein 2B. (646 aa)
	Cltb	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (179 aa)
	Stx16	Syntaxin-16 isoform X6; Belongs to the syntaxin family. (325 aa)
	Rab4b	Ras-related protein Rab-4B. (213 aa)
	Rab11b	Ras-related protein Rab-11B. (218 aa)
	Ptprs	Receptor-type tyrosine-protein phosphatase S. (1430 aa)
	Ica1	Islet cell autoantigen 1 isoform X3. (477 aa)
	Slc6a17	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (727 aa)
	Unc13c	Protein unc-13 homolog C. (2207 aa)
	Clta	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (248 aa)
	Slc17a6	Vesicular glutamate transporter 2. (582 aa)
	Sv2c	Synaptic vesicle glycoprotein 2C. (727 aa)
	Mctp1	Multiple C2 and transmembrane domain-containing protein 1. (694 aa)
	Gria2	Glutamate receptor 2. (842 aa)
	Gad2	Glutamate decarboxylase 2. (585 aa)
	Rab35	Ras-related protein Rab-35 isoform X1. (201 aa)
	Trpm7	Transient receptor potential cation channel subfamily M member 7. (1863 aa)
	Slc9b2	Mitochondrial sodium/hydrogen exchanger 9B2 isoform X3. (481 aa)
	Sh3gl2	endophilin-A1. (346 aa)
	Slc6a15	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (731 aa)
	Vamp2	Vesicle-associated membrane protein 2 isoform X2. (118 aa)
	Synj2	LOW QUALITY PROTEIN: synaptojanin-2. (1478 aa)
	Rab27b	Ras-related protein Rab-27B. (218 aa)
	Slc6a9	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (664 aa)
	Slc17a8	Vesicular glutamate transporter 3 isoform X2. (351 aa)
	Mal2	Protein MAL2. (176 aa)
	Syndig1	Synapse differentiation-inducing gene protein 1. (258 aa)
	Doc2a	Double C2-like domain-containing protein. (405 aa)
	Gria1	Glutamate receptor 1 isoform X2. (906 aa)
	Syn3	Synapsin-3 isoform X2. (323 aa)
	Synpr	Synaptoporin isoform X1. (285 aa)
	Rab26	Ras-related protein Rab-26 isoform X1. (244 aa)
	Stx1a	syntaxin-1A; Belongs to the syntaxin family. (288 aa)
	Stx12	Syntaxin-12; Belongs to the syntaxin family. (269 aa)
	Syn1	Synapsin-1. (666 aa)
	Atp6v1g2	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (118 aa)
	Bcl2l1	Bcl-2-like protein 1 isoform X1. (234 aa)
	Cacfd1	Calcium channel flower homolog. (109 aa)
	Park2	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins. (66 aa)
	Syngr2	Synaptogyrin. (224 aa)
	LOC105993437	LOW QUALITY PROTEIN: dystrophin-like. (776 aa)
	Rab3c	Ras-related protein Rab-3C isoform X1. (227 aa)
	ENSDORP00000025126	annotation not available (255 aa)
	Rab5b	Ras-related protein Rab-5B. (215 aa)
	Rab2a	Ras-related protein Rab-2A isoform X1. (212 aa)
	Rab4a	Ras-related protein Rab-4A isoform X1. (218 aa)
	Slc18a2	Synaptic vesicular amine transporter isoform X1. (518 aa)
	Doc2g	Double C2-like domain-containing protein gamma. (327 aa)
	Grin1	LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 1. (926 aa)
	Rph3a	rabphilin-3A isoform X1. (672 aa)
	Gabra2	Gamma-aminobutyric acid receptor subunit alpha-2 isoform X1; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (451 aa)
	Syt9	Synaptotagmin-9. (513 aa)
	Syt11	Synaptotagmin-11. (431 aa)
	Slc6a7	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (625 aa)
	Dnajc5	dnaJ homolog subfamily C member 5. (198 aa)
	Dtnbp1	Dysbindin. (330 aa)
	Syp	Synaptophysin. (313 aa)
	Cdkn2aipnl	CDKN2AIP N-terminal-like protein. (116 aa)
	Syngr1	Synaptogyrin-1. (240 aa)
	Fer1l4	Fer-1-like protein 4. (2008 aa)
	ENSDORP00000016454	annotation not available (81 aa)
	Apc	Adenomatous polyposis coli protein isoform X2. (2842 aa)
	Slc18a3	Vesicular acetylcholine transporter. (532 aa)
	Sv2a	Synaptic vesicle glycoprotein 2A isoform X1. (742 aa)

Your Current Organism:

Dipodomys ordii

NCBI taxonomy Id: 10020
Other names: D. ordii

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Abcc8	Park2	ENSDORP00000009022	ENSDORP00000026543	ATP-binding cassette sub-family C member 8 isoform X1.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins.	0.504
Abcc8	Slc18a2	ENSDORP00000009022	ENSDORP00000023859	ATP-binding cassette sub-family C member 8 isoform X1.	Synaptic vesicular amine transporter isoform X1.	0.432
Abcc8	Slc18a3	ENSDORP00000009022	ENSDORP00000016091	ATP-binding cassette sub-family C member 8 isoform X1.	Vesicular acetylcholine transporter.	0.427
Abcc8	Stx1a	ENSDORP00000009022	ENSDORP00000001027	ATP-binding cassette sub-family C member 8 isoform X1.	syntaxin-1A; Belongs to the syntaxin family.	0.678
Abcc8	Syt11	ENSDORP00000009022	ENSDORP00000018371	ATP-binding cassette sub-family C member 8 isoform X1.	Synaptotagmin-11.	0.472
Abcc8	Syt9	ENSDORP00000009022	ENSDORP00000018422	ATP-binding cassette sub-family C member 8 isoform X1.	Synaptotagmin-9.	0.425
Abcc8	Vamp2	ENSDORP00000009022	ENSDORP00000003617	ATP-binding cassette sub-family C member 8 isoform X1.	Vesicle-associated membrane protein 2 isoform X2.	0.477
Abcc8	Wfs1	ENSDORP00000009022	ENSDORP00000011838	ATP-binding cassette sub-family C member 8 isoform X1.	Wolframin.	0.416
Atp6v1g2	ENSDORP00000016454	ENSDORP00000027745	ENSDORP00000016454	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	annotation not available	0.960
Bcl2l1	Park2	ENSDORP00000027545	ENSDORP00000026543	Bcl-2-like protein 1 isoform X1.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins.	0.768
Clta	Cltb	ENSDORP00000004695	ENSDORP00000008329	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.963
Clta	Dtnbp1	ENSDORP00000004695	ENSDORP00000017515	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Dysbindin.	0.424
Clta	Rab11b	ENSDORP00000004695	ENSDORP00000005901	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Ras-related protein Rab-11B.	0.472
Clta	Rab4a	ENSDORP00000004695	ENSDORP00000024647	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Ras-related protein Rab-4A isoform X1.	0.428
Clta	Rab4b	ENSDORP00000004695	ENSDORP00000006290	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Ras-related protein Rab-4B.	0.425
Clta	Rab5b	ENSDORP00000004695	ENSDORP00000024717	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Ras-related protein Rab-5B.	0.555
Clta	Sh3gl2	ENSDORP00000004695	ENSDORP00000000579	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	endophilin-A1.	0.601
Clta	Syt11	ENSDORP00000004695	ENSDORP00000018371	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Synaptotagmin-11.	0.609
Clta	Vamp2	ENSDORP00000004695	ENSDORP00000003617	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Vesicle-associated membrane protein 2 isoform X2.	0.690
Cltb	Clta	ENSDORP00000008329	ENSDORP00000004695	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.963