20 items (Dipodomys ordii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Chd2	chromodomain-helicase-DNA-binding protein 2. (208 aa)
	LOC105994671	Chromobox protein homolog 3. (173 aa)
	Chd6	chromodomain-helicase-DNA-binding protein 6. (546 aa)
	Chd4	chromodomain-helicase-DNA-binding protein 4 isoform X2. (1942 aa)
	Mphosph8	M-phase phosphoprotein 8. (236 aa)
	Chd5	chromodomain-helicase-DNA-binding protein 5. (1928 aa)
	Nptxr	Neuronal pentraxin receptor isoform X1. (311 aa)
	Cbx1	Chromobox protein homolog 1 isoform X2. (185 aa)
	Cdyl	Chromodomain Y-like protein. (563 aa)
	Chd1	chromodomain-helicase-DNA-binding protein 1 isoform X4. (1713 aa)
	LOC106000651	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. (423 aa)
	Chd3	chromodomain-helicase-DNA-binding protein 3. (1964 aa)
	Cbx5	Chromobox protein homolog 5. (164 aa)
	Cbx7	Chromobox protein homolog 7. (245 aa)
	Chd9	chromodomain-helicase-DNA-binding protein 9 isoform X4. (1999 aa)
	Cbx8	Chromobox protein homolog 8 isoform X2. (365 aa)
	Suv39h2	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. (399 aa)
	Chd7	chromodomain-helicase-DNA-binding protein 7 isoform X1. (2995 aa)
	Chd8	Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...] (2478 aa)
	Suv39h1	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. (401 aa)

Your Current Organism:

Dipodomys ordii

NCBI taxonomy Id: 10020
Other names: D. ordii

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cbx1	Cbx5	ENSDORP00000016018	ENSDORP00000009987	Chromobox protein homolog 1 isoform X2.	Chromobox protein homolog 5.	0.764
Cbx1	Chd1	ENSDORP00000016018	ENSDORP00000014892	Chromobox protein homolog 1 isoform X2.	chromodomain-helicase-DNA-binding protein 1 isoform X4.	0.415
Cbx1	Chd3	ENSDORP00000016018	ENSDORP00000010071	Chromobox protein homolog 1 isoform X2.	chromodomain-helicase-DNA-binding protein 3.	0.630
Cbx1	Chd4	ENSDORP00000016018	ENSDORP00000020916	Chromobox protein homolog 1 isoform X2.	chromodomain-helicase-DNA-binding protein 4 isoform X2.	0.733
Cbx1	Chd5	ENSDORP00000016018	ENSDORP00000017407	Chromobox protein homolog 1 isoform X2.	chromodomain-helicase-DNA-binding protein 5.	0.630
Cbx1	LOC105994671	ENSDORP00000016018	ENSDORP00000025768	Chromobox protein homolog 1 isoform X2.	Chromobox protein homolog 3.	0.680
Cbx1	LOC106000651	ENSDORP00000016018	ENSDORP00000013428	Chromobox protein homolog 1 isoform X2.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	0.812
Cbx1	Suv39h1	ENSDORP00000016018	ENSDORP00000026627	Chromobox protein homolog 1 isoform X2.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	0.866
Cbx1	Suv39h2	ENSDORP00000016018	ENSDORP00000004177	Chromobox protein homolog 1 isoform X2.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	0.812
Cbx5	Cbx1	ENSDORP00000009987	ENSDORP00000016018	Chromobox protein homolog 5.	Chromobox protein homolog 1 isoform X2.	0.764
Cbx5	Chd1	ENSDORP00000009987	ENSDORP00000014892	Chromobox protein homolog 5.	chromodomain-helicase-DNA-binding protein 1 isoform X4.	0.432
Cbx5	Chd3	ENSDORP00000009987	ENSDORP00000010071	Chromobox protein homolog 5.	chromodomain-helicase-DNA-binding protein 3.	0.630
Cbx5	Chd4	ENSDORP00000009987	ENSDORP00000020916	Chromobox protein homolog 5.	chromodomain-helicase-DNA-binding protein 4 isoform X2.	0.724
Cbx5	Chd5	ENSDORP00000009987	ENSDORP00000017407	Chromobox protein homolog 5.	chromodomain-helicase-DNA-binding protein 5.	0.630
Cbx5	LOC105994671	ENSDORP00000009987	ENSDORP00000025768	Chromobox protein homolog 5.	Chromobox protein homolog 3.	0.774
Cbx5	LOC106000651	ENSDORP00000009987	ENSDORP00000013428	Chromobox protein homolog 5.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	0.850
Cbx5	Suv39h1	ENSDORP00000009987	ENSDORP00000026627	Chromobox protein homolog 5.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	0.969
Cbx5	Suv39h2	ENSDORP00000009987	ENSDORP00000004177	Chromobox protein homolog 5.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	0.850
Cbx7	Cbx8	ENSDORP00000009462	ENSDORP00000007126	Chromobox protein homolog 7.	Chromobox protein homolog 8 isoform X2.	0.621
Cbx8	Cbx7	ENSDORP00000007126	ENSDORP00000009462	Chromobox protein homolog 8 isoform X2.	Chromobox protein homolog 7.	0.621