STRINGSTRING
LOC105996972 LOC105996972 Pdia4 Pdia4 LOC105996964 LOC105996964 Pdia3 Pdia3 Calr Calr Sec22b Sec22b Tap1 Tap1 Tapbp Tapbp Vamp3 Vamp3 Calr4 Calr4 Celf6 Celf6 Sec61a2 Sec61a2 Stx4 Stx4 Tap2 Tap2 Sec61a1 Sec61a1 Vamp8 Vamp8 Snap23 Snap23 Celf3 Celf3 Celf4 Celf4 LOC105996958 LOC105996958 LOC106001397 LOC106001397 Celf5 Celf5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC105996972HLA class I histocompatibility antigen, B-46 alpha chain-like; Belongs to the MHC class I family. (220 aa)
Pdia4Protein disulfide-isomerase A4. (634 aa)
LOC105996964HLA class I histocompatibility antigen, A-11 alpha chain-like; Belongs to the MHC class I family. (345 aa)
Pdia3Protein disulfide-isomerase. (505 aa)
CalrCalreticulin. (417 aa)
Sec22bVesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family. (215 aa)
Tap1Antigen peptide transporter 1. (682 aa)
TapbpTapasin. (435 aa)
Vamp3Vesicle-associated membrane protein 3. (85 aa)
Calr4Calreticulin. (396 aa)
Celf6CUGBP Elav-like family member 6. (409 aa)
Sec61a2Protein transport protein Sec61 subunit alpha isoform 2. (476 aa)
Stx4Syntaxin-4; Belongs to the syntaxin family. (297 aa)
Tap2Antigen peptide transporter 2. (704 aa)
Sec61a1Protein transport protein Sec61 subunit alpha isoform 1. (478 aa)
Vamp8Vesicle-associated membrane protein 8. (103 aa)
Snap23Synaptosomal-associated protein; Belongs to the SNAP-25 family. (222 aa)
Celf3CUGBP Elav-like family member 3 isoform X1. (496 aa)
Celf4CUGBP Elav-like family member 4 isoform X1. (504 aa)
LOC105996958LOW QUALITY PROTEIN: HLA class I histocompatibility antigen, B-27 alpha chain-like; Belongs to the MHC class I family. (322 aa)
LOC106001397Patr class I histocompatibility antigen, B-1 alpha chain-like; Belongs to the MHC class I family. (273 aa)
Celf5CUGBP Elav-like family member 5. (276 aa)
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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