70 items (Dipodomys ordii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Fosl2	Fos-related antigen 2. (327 aa)
	ENSDORP00000026390	annotation not available (153 aa)
	Fos	Proto-oncogene c-Fos. (380 aa)
	Harbi1	Putative nuclease HARBI1. (44 aa)
	Grb2	Growth factor receptor-bound protein 2. (217 aa)
	Fcer1g	High affinity immunoglobulin epsilon receptor subunit gamma. (69 aa)
	Map2k4	Dual specificity mitogen-activated protein kinase kinase 4; Belongs to the protein kinase superfamily. (130 aa)
	Pak2	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (507 aa)
	Ms4a15	Membrane-spanning 4-domains subfamily A member 15. (245 aa)
	ENSDORP00000024385	annotation not available (125 aa)
	ENSDORP00000024326	annotation not available (125 aa)
	ENSDORP00000024064	annotation not available (125 aa)
	Hras	GTPase HRas isoform X1. (192 aa)
	ENSDORP00000024059	annotation not available (148 aa)
	Igll1	Immunoglobulin lambda-like polypeptide 5. (213 aa)
	Spns1	Protein spinster homolog 1. (528 aa)
	ENSDORP00000023140	annotation not available (164 aa)
	Fcer1a	High affinity immunoglobulin epsilon receptor subunit alpha isoform X1. (250 aa)
	Nras	GTPase NRas. (189 aa)
	ENSDORP00000021758	annotation not available (151 aa)
	ENSDORP00000021714	annotation not available (125 aa)
	LOC106000746	Uncharacterized protein LOC106000746. (154 aa)
	ENSDORP00000021285	annotation not available (174 aa)
	Kras	Kirsten rat sarcoma viral oncogene homolog. (163 aa)
	Vav1	Proto-oncogene vav. (845 aa)
	ENSDORP00000020543	annotation not available (125 aa)
	ENSDORP00000020531	annotation not available (125 aa)
	ENSDORP00000020304	annotation not available (160 aa)
	ENSDORP00000019940	annotation not available (148 aa)
	ENSDORP00000019787	annotation not available (125 aa)
	LOC106001053	Uncharacterized protein LOC106001053. (126 aa)
	ENSDORP00000018683	annotation not available (148 aa)
	Fcrls	Fc receptor-like protein 2. (495 aa)
	ENSDORP00000017709	annotation not available (94 aa)
	LOC105998330	TCR gamma alternate reading frame protein. (172 aa)
	ENSDORP00000017547	annotation not available (125 aa)
	ENSDORP00000017263	annotation not available (125 aa)
	Mapk1	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (360 aa)
	Pak1	Non-specific serine/threonine protein kinase. (544 aa)
	ENSDORP00000016707	annotation not available (126 aa)
	ENSDORP00000016550	annotation not available (148 aa)
	Nradd	Death domain-containing membrane protein NRADD-like. (204 aa)
	Clnk	Cytokine-dependent hematopoietic cell linker. (370 aa)
	Lcp2	Lymphocyte cytosolic protein 2. (314 aa)
	Ms4a4a	Membrane-spanning 4-domains subfamily A member 4A-like isoform X1. (226 aa)
	Plcg2	Phosphoinositide phospholipase C. (1065 aa)
	Lat	Linker for activation of T-cells family member 1 isoform X1. (234 aa)
	Grap2	GRB2-related adapter protein 2 isoform X2. (324 aa)
	LOC105996545	Fc receptor-like protein 1 isoform X1. (308 aa)
	Rac1	Ras-related C3 botulinum toxin substrate 1. (187 aa)
	Plcg1	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades. (1302 aa)
	Vav2	Guanine nucleotide exchange factor VAV2. (766 aa)
	Csde1	Cold shock domain-containing protein E1 isoform X1. (798 aa)
	Kras-2	GTPase KRas isoform X4. (189 aa)
	Mapk10	Mitogen-activated protein kinase. (486 aa)
	Map2k7	Dual specificity mitogen-activated protein kinase kinase 7 isoform X1. (435 aa)
	Map3k1	Mitogen-activated protein kinase kinase kinase 1. (1468 aa)
	Ms4a2	High affinity immunoglobulin epsilon receptor subunit beta. (243 aa)
	Ms4a12	Membrane-spanning 4-domains subfamily A member 12. (260 aa)
	Ms4a1	B-lymphocyte antigen CD20 isoform X1. (298 aa)
	Mapk9	Mitogen-activated protein kinase. (382 aa)
	Shc1	SHC-transforming protein 1 isoform X2. (473 aa)
	Mapk3	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (374 aa)
	Sos1	Son of sevenless homolog 1. (1301 aa)
	Vav3	Guanine nucleotide exchange factor VAV3. (847 aa)
	Ankhd1	Ankyrin repeat and KH domain-containing protein 1. (2453 aa)
	Lyn	Tyrosine-protein kinase. (512 aa)
	Ms4a8a	Membrane-spanning 4-domains subfamily A member 8-like. (280 aa)
	Syk	Tyrosine-protein kinase. (633 aa)
	Mapk8	Mitogen-activated protein kinase. (427 aa)

Your Current Organism:

Dipodomys ordii

NCBI taxonomy Id: 10020
Other names: D. ordii

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Clnk	Csde1	ENSDORP00000016220	ENSDORP00000010910	Cytokine-dependent hematopoietic cell linker.	Cold shock domain-containing protein E1 isoform X1.	0.506
Clnk	Grap2	ENSDORP00000016220	ENSDORP00000014506	Cytokine-dependent hematopoietic cell linker.	GRB2-related adapter protein 2 isoform X2.	0.709
Clnk	Grb2	ENSDORP00000016220	ENSDORP00000027785	Cytokine-dependent hematopoietic cell linker.	Growth factor receptor-bound protein 2.	0.709
Clnk	Hras	ENSDORP00000016220	ENSDORP00000025523	Cytokine-dependent hematopoietic cell linker.	GTPase HRas isoform X1.	0.506
Clnk	Kras	ENSDORP00000016220	ENSDORP00000021115	Cytokine-dependent hematopoietic cell linker.	Kirsten rat sarcoma viral oncogene homolog.	0.506
Clnk	Kras-2	ENSDORP00000016220	ENSDORP00000010780	Cytokine-dependent hematopoietic cell linker.	GTPase KRas isoform X4.	0.506
Clnk	Lat	ENSDORP00000016220	ENSDORP00000015026	Cytokine-dependent hematopoietic cell linker.	Linker for activation of T-cells family member 1 isoform X1.	0.737
Clnk	Lyn	ENSDORP00000016220	ENSDORP00000000698	Cytokine-dependent hematopoietic cell linker.	Tyrosine-protein kinase.	0.605
Clnk	Nras	ENSDORP00000016220	ENSDORP00000022462	Cytokine-dependent hematopoietic cell linker.	GTPase NRas.	0.506
Clnk	Pak1	ENSDORP00000016220	ENSDORP00000016910	Cytokine-dependent hematopoietic cell linker.	Non-specific serine/threonine protein kinase.	0.415
Clnk	Pak2	ENSDORP00000016220	ENSDORP00000025207	Cytokine-dependent hematopoietic cell linker.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.415
Clnk	Plcg1	ENSDORP00000016220	ENSDORP00000011410	Cytokine-dependent hematopoietic cell linker.	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades.	0.687
Clnk	Plcg2	ENSDORP00000016220	ENSDORP00000015075	Cytokine-dependent hematopoietic cell linker.	Phosphoinositide phospholipase C.	0.687
Clnk	Rac1	ENSDORP00000016220	ENSDORP00000013529	Cytokine-dependent hematopoietic cell linker.	Ras-related C3 botulinum toxin substrate 1.	0.626
Clnk	Shc1	ENSDORP00000016220	ENSDORP00000003514	Cytokine-dependent hematopoietic cell linker.	SHC-transforming protein 1 isoform X2.	0.478
Clnk	Sos1	ENSDORP00000016220	ENSDORP00000002200	Cytokine-dependent hematopoietic cell linker.	Son of sevenless homolog 1.	0.439
Clnk	Syk	ENSDORP00000016220	ENSDORP00000000466	Cytokine-dependent hematopoietic cell linker.	Tyrosine-protein kinase.	0.552
Csde1	Clnk	ENSDORP00000010910	ENSDORP00000016220	Cold shock domain-containing protein E1 isoform X1.	Cytokine-dependent hematopoietic cell linker.	0.506
Csde1	Grap2	ENSDORP00000010910	ENSDORP00000014506	Cold shock domain-containing protein E1 isoform X1.	GRB2-related adapter protein 2 isoform X2.	0.517
Csde1	Grb2	ENSDORP00000010910	ENSDORP00000027785	Cold shock domain-containing protein E1 isoform X1.	Growth factor receptor-bound protein 2.	0.790