STRINGSTRING
Uba52 Uba52 Pcna Pcna Rfc4 Rfc4 LOC105993014 LOC105993014 Kxd1 Kxd1 ENSDORP00000019733 ENSDORP00000019733 Rfc3 Rfc3 Rcbtb2 Rcbtb2 Rev1 Rev1 Meiob Meiob Rfc2 Rfc2 Rfc5 Rfc5 Rev3l Rev3l Mad2l2 Mad2l2 Polk Polk Rps27a Rps27a Rcbtb1 Rcbtb1 Rpa2 Rpa2 Atad5 Atad5 Ubc Ubc Rfc1 Rfc1 Rpa1 Rpa1 Ubb Ubb LOC105986631 LOC105986631
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Uba52ubiquitin-60S ribosomal protein L40. (128 aa)
PcnaProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
Rfc4Replication factor C subunit 4 isoform X1. (97 aa)
LOC105993014ubiquitin-40S ribosomal protein S27a pseudogene. (147 aa)
Kxd1kxDL motif-containing protein 1 isoform X2. (183 aa)
ENSDORP00000019733annotation not available (100 aa)
Rfc3Replication factor C subunit 3. (366 aa)
Rcbtb2RCC1 and BTB domain-containing protein 2 isoform X1. (538 aa)
Rev1DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1236 aa)
MeiobMeiosis-specific with OB domain-containing protein. (419 aa)
Rfc2Replication factor C subunit 2. (324 aa)
Rfc5Replication factor C subunit 5. (332 aa)
Rev3lDNA polymerase zeta catalytic subunit. (3096 aa)
Mad2l2Mitotic spindle assembly checkpoint protein MAD2B. (211 aa)
PolkDNA polymerase kappa isoform X1. (546 aa)
Rps27aubiquitin-40S ribosomal protein S27a. (156 aa)
Rcbtb1RCC1 and BTB domain-containing protein 1. (323 aa)
Rpa2Replication protein A 32 kDa subunit isoform X1. (255 aa)
Atad5LOW QUALITY PROTEIN: ATPase family AAA domain-containing protein 5. (1786 aa)
Ubcpolyubiquitin-C. (153 aa)
Rfc1Replication factor C subunit 1. (1119 aa)
Rpa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (616 aa)
Ubbpolyubiquitin-B. (155 aa)
LOC105986631Ubiquitin-like. (77 aa)
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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