35 items (Dipodomys ordii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Celf6	CUGBP Elav-like family member 6. (409 aa)
	Pdia4	Protein disulfide-isomerase A4. (634 aa)
	Sar1a	GTP-binding protein SAR1a; Belongs to the small GTPase superfamily. SAR1 family. (198 aa)
	LOC105989822	Aminopeptidase. (942 aa)
	Ankrd45	Ankyrin repeat domain-containing protein 45 isoform X1. (165 aa)
	LOC105996964	HLA class I histocompatibility antigen, A-11 alpha chain-like; Belongs to the MHC class I family. (345 aa)
	Sec24b	LOW QUALITY PROTEIN: protein transport protein Sec24B. (1232 aa)
	Clgn	Calmegin. (611 aa)
	Sec31b	Protein transport protein Sec31B. (1175 aa)
	Calr4	Calreticulin. (396 aa)
	Calr	Calreticulin. (417 aa)
	Sec24a	Protein transport protein Sec24A. (1063 aa)
	ENSDORP00000021878	annotation not available (169 aa)
	Sec23a	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (765 aa)
	Tap1	Antigen peptide transporter 1. (682 aa)
	Celf3	CUGBP Elav-like family member 3 isoform X1. (496 aa)
	LOC106001397	Patr class I histocompatibility antigen, B-1 alpha chain-like; Belongs to the MHC class I family. (273 aa)
	Sec24d	Protein transport protein Sec24D. (883 aa)
	LOC105996972	HLA class I histocompatibility antigen, B-46 alpha chain-like; Belongs to the MHC class I family. (220 aa)
	Sec13	Protein SEC13 homolog; Belongs to the WD repeat SEC13 family. (323 aa)
	Pdia3	Protein disulfide-isomerase. (505 aa)
	Hspa5	78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family. (656 aa)
	Sec23b	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (748 aa)
	Tapbp	Tapasin. (435 aa)
	Canx	Calnexin. (560 aa)
	Sar1b	GTP-binding protein SAR1b; Belongs to the small GTPase superfamily. SAR1 family. (198 aa)
	Calr3	Calreticulin-3 isoform X2. (318 aa)
	Bcap29	B-cell receptor-associated protein 29. (218 aa)
	Sec31a	Protein transport protein Sec31A isoform X5. (250 aa)
	Tap2	Antigen peptide transporter 2. (704 aa)
	Celf4	CUGBP Elav-like family member 4 isoform X1. (504 aa)
	LOC105996958	LOW QUALITY PROTEIN: HLA class I histocompatibility antigen, B-27 alpha chain-like; Belongs to the MHC class I family. (322 aa)
	Bcap31	B-cell receptor-associated protein 31. (246 aa)
	Celf5	CUGBP Elav-like family member 5. (276 aa)
	Sec24c	Protein transport protein Sec24C. (1065 aa)

Your Current Organism:

Dipodomys ordii

NCBI taxonomy Id: 10020
Other names: D. ordii

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ankrd45	Calr	ENSDORP00000003906	ENSDORP00000023014	Ankyrin repeat domain-containing protein 45 isoform X1.	Calreticulin.	0.887
Ankrd45	Calr3	ENSDORP00000003906	ENSDORP00000012298	Ankyrin repeat domain-containing protein 45 isoform X1.	Calreticulin-3 isoform X2.	0.887
Ankrd45	Calr4	ENSDORP00000003906	ENSDORP00000024217	Ankyrin repeat domain-containing protein 45 isoform X1.	Calreticulin.	0.887
Ankrd45	Canx	ENSDORP00000003906	ENSDORP00000020701	Ankyrin repeat domain-containing protein 45 isoform X1.	Calnexin.	0.932
Ankrd45	Clgn	ENSDORP00000003906	ENSDORP00000000159	Ankyrin repeat domain-containing protein 45 isoform X1.	Calmegin.	0.932
Ankrd45	LOC105996958	ENSDORP00000003906	ENSDORP00000006549	Ankyrin repeat domain-containing protein 45 isoform X1.	LOW QUALITY PROTEIN: HLA class I histocompatibility antigen, B-27 alpha chain-like; Belongs to the MHC class I family.	0.479
Ankrd45	LOC105996964	ENSDORP00000003906	ENSDORP00000003059	Ankyrin repeat domain-containing protein 45 isoform X1.	HLA class I histocompatibility antigen, A-11 alpha chain-like; Belongs to the MHC class I family.	0.479
Ankrd45	LOC105996972	ENSDORP00000003906	ENSDORP00000014550	Ankyrin repeat domain-containing protein 45 isoform X1.	HLA class I histocompatibility antigen, B-46 alpha chain-like; Belongs to the MHC class I family.	0.479
Ankrd45	LOC106001397	ENSDORP00000003906	ENSDORP00000015976	Ankyrin repeat domain-containing protein 45 isoform X1.	Patr class I histocompatibility antigen, B-1 alpha chain-like; Belongs to the MHC class I family.	0.479
Ankrd45	Pdia3	ENSDORP00000003906	ENSDORP00000013563	Ankyrin repeat domain-containing protein 45 isoform X1.	Protein disulfide-isomerase.	0.898
Ankrd45	Pdia4	ENSDORP00000003906	ENSDORP00000004442	Ankyrin repeat domain-containing protein 45 isoform X1.	Protein disulfide-isomerase A4.	0.898
Ankrd45	Sec13	ENSDORP00000003906	ENSDORP00000014424	Ankyrin repeat domain-containing protein 45 isoform X1.	Protein SEC13 homolog; Belongs to the WD repeat SEC13 family.	0.668
Ankrd45	Sec23a	ENSDORP00000003906	ENSDORP00000019351	Ankyrin repeat domain-containing protein 45 isoform X1.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.513
Ankrd45	Sec23b	ENSDORP00000003906	ENSDORP00000013353	Ankyrin repeat domain-containing protein 45 isoform X1.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.513
Ankrd45	Sec31a	ENSDORP00000003906	ENSDORP00000009888	Ankyrin repeat domain-containing protein 45 isoform X1.	Protein transport protein Sec31A isoform X5.	0.428
Ankrd45	Sec31b	ENSDORP00000003906	ENSDORP00000000112	Ankyrin repeat domain-containing protein 45 isoform X1.	Protein transport protein Sec31B.	0.428
Ankrd45	Tap1	ENSDORP00000003906	ENSDORP00000017527	Ankyrin repeat domain-containing protein 45 isoform X1.	Antigen peptide transporter 1.	0.537
Ankrd45	Tap2	ENSDORP00000003906	ENSDORP00000007800	Ankyrin repeat domain-containing protein 45 isoform X1.	Antigen peptide transporter 2.	0.537
Bcap29	Bcap31	ENSDORP00000009956	ENSDORP00000005637	B-cell receptor-associated protein 29.	B-cell receptor-associated protein 31.	0.758
Bcap29	Canx	ENSDORP00000009956	ENSDORP00000020701	B-cell receptor-associated protein 29.	Calnexin.	0.494