16 items (Dipodomys ordii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Gnal	G protein subunit alpha L. (140 aa)
	Gnaq	Guanine nucleotide-binding protein G(Q) subunit alpha. (333 aa)
	Gnai1	Guanine nucleotide-binding protein G(I) subunit alpha-1. (354 aa)
	Gna14	Guanine nucleotide-binding protein subunit alpha-14-like. (372 aa)
	Gna13	Guanine nucleotide-binding protein subunit alpha-13. (372 aa)
	Gnat2	Guanine nucleotide-binding protein G(T) subunit alpha-2. (354 aa)
	Gnai3	Guanine nucleotide-binding protein G(K) subunit alpha. (354 aa)
	Gna15	Guanine nucleotide-binding protein subunit alpha-15. (342 aa)
	Gnai2	Guanine nucleotide-binding protein G(I) subunit alpha-2. (355 aa)
	Gnas	Guanine nucleotide-binding protein G(S) subunit alpha isoform X1. (394 aa)
	Gnat3	Guanine nucleotide-binding protein G(T) subunit alpha-3. (354 aa)
	Gnat1	Guanine nucleotide-binding protein G(T) subunit alpha-1. (350 aa)
	Gna12	Guanine nucleotide-binding protein subunit alpha-12. (305 aa)
	Gnao1	Guanine nucleotide-binding protein G(O) subunit alpha isoform X1. (354 aa)
	Gna11	Guanine nucleotide-binding protein subunit alpha-11. (313 aa)
	Gnaz	Guanine nucleotide-binding protein G(Z) subunit alpha. (355 aa)

Your Current Organism:

Dipodomys ordii

NCBI taxonomy Id: 10020
Other names: D. ordii

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Gna11	Gna12	ENSDORP00000025760	ENSDORP00000027362	Guanine nucleotide-binding protein subunit alpha-11.	Guanine nucleotide-binding protein subunit alpha-12.	0.499
Gna11	Gna13	ENSDORP00000025760	ENSDORP00000015641	Guanine nucleotide-binding protein subunit alpha-11.	Guanine nucleotide-binding protein subunit alpha-13.	0.559
Gna11	Gna15	ENSDORP00000025760	ENSDORP00000007973	Guanine nucleotide-binding protein subunit alpha-11.	Guanine nucleotide-binding protein subunit alpha-15.	0.707
Gna11	Gnai1	ENSDORP00000025760	ENSDORP00000016942	Guanine nucleotide-binding protein subunit alpha-11.	Guanine nucleotide-binding protein G(I) subunit alpha-1.	0.543
Gna11	Gnai2	ENSDORP00000025760	ENSDORP00000005963	Guanine nucleotide-binding protein subunit alpha-11.	Guanine nucleotide-binding protein G(I) subunit alpha-2.	0.564
Gna11	Gnai3	ENSDORP00000025760	ENSDORP00000013971	Guanine nucleotide-binding protein subunit alpha-11.	Guanine nucleotide-binding protein G(K) subunit alpha.	0.562
Gna11	Gnao1	ENSDORP00000025760	ENSDORP00000026234	Guanine nucleotide-binding protein subunit alpha-11.	Guanine nucleotide-binding protein G(O) subunit alpha isoform X1.	0.793
Gna11	Gnat1	ENSDORP00000025760	ENSDORP00000000350	Guanine nucleotide-binding protein subunit alpha-11.	Guanine nucleotide-binding protein G(T) subunit alpha-1.	0.464
Gna11	Gnat2	ENSDORP00000025760	ENSDORP00000015120	Guanine nucleotide-binding protein subunit alpha-11.	Guanine nucleotide-binding protein G(T) subunit alpha-2.	0.463
Gna11	Gnat3	ENSDORP00000025760	ENSDORP00000003716	Guanine nucleotide-binding protein subunit alpha-11.	Guanine nucleotide-binding protein G(T) subunit alpha-3.	0.464
Gna11	Gnaz	ENSDORP00000025760	ENSDORP00000025358	Guanine nucleotide-binding protein subunit alpha-11.	Guanine nucleotide-binding protein G(Z) subunit alpha.	0.439
Gna12	Gna11	ENSDORP00000027362	ENSDORP00000025760	Guanine nucleotide-binding protein subunit alpha-12.	Guanine nucleotide-binding protein subunit alpha-11.	0.499
Gna12	Gna13	ENSDORP00000027362	ENSDORP00000015641	Guanine nucleotide-binding protein subunit alpha-12.	Guanine nucleotide-binding protein subunit alpha-13.	0.945
Gna12	Gna14	ENSDORP00000027362	ENSDORP00000016517	Guanine nucleotide-binding protein subunit alpha-12.	Guanine nucleotide-binding protein subunit alpha-14-like.	0.502
Gna12	Gna15	ENSDORP00000027362	ENSDORP00000007973	Guanine nucleotide-binding protein subunit alpha-12.	Guanine nucleotide-binding protein subunit alpha-15.	0.414
Gna12	Gnai1	ENSDORP00000027362	ENSDORP00000016942	Guanine nucleotide-binding protein subunit alpha-12.	Guanine nucleotide-binding protein G(I) subunit alpha-1.	0.514
Gna12	Gnai2	ENSDORP00000027362	ENSDORP00000005963	Guanine nucleotide-binding protein subunit alpha-12.	Guanine nucleotide-binding protein G(I) subunit alpha-2.	0.516
Gna12	Gnai3	ENSDORP00000027362	ENSDORP00000013971	Guanine nucleotide-binding protein subunit alpha-12.	Guanine nucleotide-binding protein G(K) subunit alpha.	0.515
Gna12	Gnal	ENSDORP00000027362	ENSDORP00000021513	Guanine nucleotide-binding protein subunit alpha-12.	G protein subunit alpha L.	0.681
Gna12	Gnao1	ENSDORP00000027362	ENSDORP00000026234	Guanine nucleotide-binding protein subunit alpha-12.	Guanine nucleotide-binding protein G(O) subunit alpha isoform X1.	0.492