STRINGSTRING
SCO3871 SCO3871 SCO2885 SCO2885 SCO2743 SCO2743 SCO0469 SCO0469 SCO4937 SCO4937 SCO5031 SCO5031 SCO5032 SCO5032 SCO6420 SCO6420 SCO7129 SCO7129 SCO7353 SCO7353 SCO0142 SCO0142 SCO4835 SCO4835 SCO4834 SCO4834
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SCO3871SCH18.08, possible decarboxylase, len: 136 aa; similar to TR:O26336 (EMBL:AE000810) Methanobacterium thermoautotrophicum gamma-carboxymuconolactone decarboxylase Mth234, 125 aa; fasta scores: opt: 231 z-score: 310.2 E(): 8.3e-10; 38.3% identity in 107 aa overlap. (136 aa)
SCO2885Conserved hypothetical protein SCE6.22c; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (157 aa)
SCO2743Conserved hypothetical protein SCC57A.14; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (161 aa)
SCO0469Hypothetical protein SCF76.09; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (173 aa)
SCO4937SCK13.29c, hypothetical protein, len: 172 aa; similar to TR:CAC04235 (EMBL:AL391515) Streptomyces coelicolor conserved hypothetical protein SC4B10.30c, 156 aa; fasta scores: opt: 215 z-score: 274.7 E(): 9.2e-08; 30.9% identity in 139 aa overlap. (172 aa)
SCO5031Alkyl hydroperoxide reductase system hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. (178 aa)
SCO5032SCK7.05c, ahpC, alkyl hydroperoxide reductase, len:184 aa; identical to previously seqeunced TR:Q9RN72 (EMBL:AF186371) Streptomyces coelicolor A3(2) AhpC, 184 aa. Contains Pfam match to entry PF00578 AhpC-TSA, AhpC/TSA family. (184 aa)
SCO6420Putative DNA-binding protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (337 aa)
SCO7129Conserved hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (156 aa)
SCO7353Conserved hypothetical protein SC9H11.07; SC9H11.07, unknown, len: 155 aa. Highly similar to many bacterioferritin comigratory proteins e.g. Mycobacterium tuberculosis TR:O53911(EMBL:AL02200) putative bacterioferritin comigratory protein, BcpB (154 aa), fasta scores opt: 618 z-score: 761.9 E():0 63.8% identity in 149 aa overlap. Contains a Pfam match to entry PF00578 AhpC-TSA, AhpC/TSA family. (155 aa)
SCO0142Conserved hypothetical protein SCJ33.06c; SCJ33.06c, unknown, len: 601 aa. Similar to the C-terminus of Mycobacterium tuberculosis hypothetical proteins SW:YS74_MYCTU (EMBL; Z74024) (695 aa), fasta scores opt: 331 z-score: 375.0 E(): 1.6e-13 30.3% identity in 185 aa overlap and SW:YX05_MYCTU (EMBL; Z74024) (695 aa), fasta scores opt: 331 z-score: 375.0 E(): 1.6e-13 30.3% identity in 185 aa overlap. Contains 5x Pfam match to entry PF01436 NHL, NHL repeat and possible membrane spanning hydrophobic domains. (601 aa)
SCO4835Conserved hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (169 aa)
SCO4834Conserved hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (148 aa)
Your Current Organism:
Streptomyces coelicolor
NCBI taxonomy Id: 100226
Other names: S. coelicolor A3(2), Streptomyces coelicolor A3(2)
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