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SCO0818 SCO0818 SCO7690 SCO7690 SCO7689 SCO7689 SCO7680 SCO7680 SCO7567 SCO7567 SCO7566 SCO7566 SCO7545 SCO7545 SCO7459 SCO7459 SCO7400 SCO7400 SCO7217 SCO7217 SCO7182 SCO7182 SCO7181 SCO7181 SCO7008 SCO7008 SCO6981 SCO6981 SCO6814 SCO6814 SCO6758 SCO6758 SCO6742 SCO6742 SCO6720 SCO6720 SCO6719 SCO6719 SCO6684 SCO6684 SCO6683 SCO6683 SCO6677 SCO6677 SCO6567 SCO6567 SCO6517 SCO6517 SCO6512 SCO6512 SCO6455 SCO6455 SCO6454 SCO6454 SCO6367 SCO6367 SCO6366 SCO6366 SCO6360 SCO6360 SCO6295 SCO6295 SCO6259 SCO6259 SCO6111 SCO6111 SCO6095 SCO6095 SCO6062 SCO6062 SCO6047 SCO6047 SCO6010 SCO6010 SCO5958 SCO5958 SCO5923 SCO5923 SCO5870 SCO5870 SCO5818 SCO5818 SCO5777 SCO5777 SCO5713 SCO5713 SCO5712 SCO5712 SCO5668 SCO5668 SCO5654 SCO5654 SCO5648 SCO5648 SCO5480 SCO5480 SCO5479 SCO5479 SCO5452 SCO5452 SCO5451 SCO5451 SCO5450 SCO5450 SCO5449 SCO5449 SCO5448 SCO5448 SCO5395 SCO5395 SCO5393 SCO5393 SCO5383 SCO5383 SCO5258 SCO5258 SCO5129 SCO5129 SCO5121 SCO5121 SCO5120 SCO5120 SCO5116 SCO5116 SCO5115 SCO5115 SCO5035 SCO5035 SCO4963 SCO4963 SCO4936 SCO4936 SCO4886 SCO4886 SCO4830 SCO4830 SCO4666 SCO4666 SCO4585 SCO4585 SCO4405 SCO4405 SCO4397 SCO4397 SCO4359 SCO4359 SCO4240 SCO4240 SCO4148 SCO4148 SCO4139 SCO4139 SCO4075 SCO4075 SCO3958 SCO3958 SCO3956 SCO3956 SCO3947 SCO3947 SCO3824 SCO3824 SCO3755 SCO3755 SCO3752 SCO3752 SCO3706 SCO3706 SCO3633 SCO3633 SCO3453 SCO3453 SCO3418 SCO3418 SCO3339 SCO3339 SCO3235 SCO3235 SCO3224 SCO3224 SCO3161 SCO3161 SCO3147 SCO3147 SCO3111 SCO3111 SCO3089 SCO3089 SCO2996 SCO2996 SCO2969 SCO2969 SCO2931 SCO2931 SCO2894 SCO2894 SCO2831 SCO2831 SCO2763 SCO2763 SCO2746 SCO2746 SCO2723 SCO2723 SCO2677 SCO2677 SCO2674 SCO2674 SCO2506 SCO2506 SCO2464 SCO2464 SCO2463 SCO2463 SCO2422 SCO2422 SCO2405 SCO2405 SCO2324 SCO2324 SCO2305 SCO2305 SCO2274 SCO2274 SCO2257 SCO2257 SCO2061 SCO2061 SCO2012 SCO2012 SCO2011 SCO2011 SCO1958 SCO1958 SCO1928 SCO1928 SCO1922 SCO1922 SCO1840 SCO1840 SCO1806 SCO1806 SCO1798 SCO1798 SCO1785 SCO1785 SCO1742 SCO1742 SCO1719 SCO1719 SCO1707 SCO1707 SCO1621 SCO1621 SCO1559 SCO1559 SCO1367 SCO1367 SCO1258 SCO1258 SCO1148 SCO1148 SCO1147 SCO1147 SCO1144 SCO1144 SCO1032 SCO1032 SCO0998 SCO0998 SCO0918 SCO0918 SCO0824 SCO0824 SCO0811 SCO0811 SCO0756 SCO0756 SCO0755 SCO0755 SCO0742 SCO0742 SCO0710 SCO0710 SCO0709 SCO0709 SCO0700 SCO0700 SCO0636 SCO0636 SCO0495 SCO0495 SCO0493 SCO0493 SCO0491 SCO0491 SCO0476 SCO0476 SCO0374 SCO0374 SCO0322 SCO0322 SCO0121 SCO0121
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colored nodes:
query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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SCO0818SCF43A.08, probable ABC transporter ATP-binding protein, len: 264 aa; similar to many hypothetical ABC transporter ATP-binding proteins e.g. TR:O28803 (EMBL:AE001001) Archaeoglobus fulgidus putative ABC transporter ATP-binding protein (226 aa), fasta scores; opt: 675 z-score: 764.2 E(): 0, 48.2% identity in 220 aa overlap. Alternative start codons are present at codons 2 and 4. Similar to many from S.coelicolor e.g. TR:O54136 (EMBL:AL021530) S.coelicolor probable ABC-transporter ATP binding protein (230 aa) (44.5% identity in 218 aa overlap). Contains Pfam match to entry PF00005 ABC_tr [...] (264 aa)
SCO7690SC4C2.25, probable ABC transporter ATP-binding protein, len: 587 aa; similar to SW:YD49_MYCTU (EMBL:Z75555) Mycobacterium tuberculosis hypothetical ABC transporter ATP-binding protein RV1349, 579 aa; fasta scores: opt: 1144 z-score: 1191.3 E(): 0; 36.8% identity in 590 aa overlap. Contains Pfam matches to entries PF00664 ABC_membrane, ABC transporter transmembrane region and PF00005 ABC_tran, ABC transporter and matches to Prosite entries PS00038 Myc-type, 'helix-loop-helix' dimerization domain signature, PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family [...] (587 aa)
SCO7689SC4C2.24, probable ABC transporter ATP-binding protein, len: 551 aa; similar to C-terminal region of SW:YD48_MYCTU (EMBL:Z75555) Mycobacterium tuberculosis hypothetical ABC transporter ATP-binding protein RV1348, 859 aa; fasta scores: opt: 1313 z-score: 1377.6 E(): 0; 43.8% identity in 548 aa overlap. Contains Pfam matches to entries PF00664 ABC_membrane, ABC transporter transmembrane region and PF00005 ABC_tran, ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. Also contains possible hydrophobic [...] (608 aa)
SCO7680SC4C2.15, possible ABC transporter ATP-binding protein, len: 541 aa; similar to TR:AAG05449 (EMBL:AE004632) Pseudomonas aeruginosa probable ATP-binding component of ABC transporter PA2061, 536 aa; fasta scores: opt: 861 z-score: 716.8 E(): 2.2e-32; 37.4% identity in 522 aa overlap. Contains 2x Pfam matches to entry PF00005 ABC_tran, ABC transporter and 2x matches to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop) and 2x to PS00211 ABC transporters family signature. (541 aa)
SCO7567SC5F1.21, probable oligopeptide ABC transporter ATP-binding protein, len: 316 aa; similar to SW:OPPF_BACSU (EMBL:X56347) Bacillus subtilis oligopeptide transport ATP-binding protein OppF, 308 aa; fasta scores: opt: 811 z-score: 836.7 E(): 0; 46.9% identity in 273 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. (316 aa)
SCO7566SC5F1.20, probable oligopeptide ABC transporter ATP-binding protein, len: 288 aa; similar to SW:OPPD_BACSU (EMBL:X56347) Bacillus subtilis oligopeptide transport ATP-binding protein OppD, 358 aa; fasta scores: opt: 934 z-score: 1022.9 E(): 0; 54.2% identity in 262 aa overlap and to TR:CAC05750 (EMBL:AL391751) Streptomyces coelicolor putative peptide transport system ATP-binding protein SC9E12.05, 327 aa; fasta scores: opt: 905 z-score: 714.2 E(): 4e-34; 53.5% identity in 260 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and match to Prosite entry PS00017 AT [...] (288 aa)
SCO7545SC8G12.21, possible ABC-transport protein, ATP-binding component, len: 270 aa. Similar to multiple ABC-transport proteins e.g. Escherichia coli SW:TAUB_ECOLI(EMBL:D85613) taurine transport ATP-binding protein, TauB (255 aa), fasta scores opt: 665 z-score: 772.8 E(): 0 43.4% identity in 235 aa overlap. Contains a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop) and a Pfam match to entry PF00005 ABC_tran, ABC transporter. (270 aa)
SCO7459SC5C11.16c, possible ABC transporter protein, ATP-binding component, len: 279 aa. Highly similar to several transporters e.g. Escherichia coli SW:FEPC_ECOLI(EMBL:X57471) ferric enterobactin transport ATP-binding protein, FepC (271 aa), fasta scores opt: 408 z-score: 486.3 E(): 1.1e-19 35.2% identity in 244 aa overlap and Streptomyces coelicolor TR:Q9X9Z4(EMBL:AL079332) putative ABC transporter ATP-binding protein, SCI5.06c (265 aa), fasta scores opt: 666 z-score: 788.8 E():0 44.2% identity in 260 aa overlap. Contains Prosite hits to PS00017 ATP/GTP-binding site motif A (P-loop)and PS00 [...] (279 aa)
SCO7400SC10G8.28c, possible ABC-transport protein, ATP-binding component, len: 292 aa. Highly similar to many e.g. Escherichia coli SW:FEPC_ECOLI(EMBL:X57471) ferric enterobactin transport ATP-binding protein, FepC (271 aa), fasta scores opt: 670 z-score: 720.4 E(): 1e-32 41.7% identity in 266 aa overlap and Escherichia coli SW:FHUC_ECOLI(EMBL:X05810) ferrichrome transport ATP-binding protein, FhuC (265 aa), fasta scores opt: 569 z-score: 613.5 E(): 9.2e-27 39.2% identity in 240 aa overlap. Also similar to Streptomyces coelicolor TR:CAB53325(EMBL:AL109974) putative iron-siderophore ABC-transp [...] (292 aa)
SCO7217SC2H12.16, possible iron transport protein, ATP-binding component, len: 258 aa. Highly similar to many e.g. Escherichia coli SW:FECE_ECOLI(EMBL:M26397) iron(iii) dicitrate transport ATP-binding protein, FecE (255aa), fasta scores opt: 616 z-score: 685.9 E(): 9.8e-31 43.1% identity in 246 aa overlap. Contains Prosite hits to PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop) and a Pfam match to entry PF00005 ABC_tran, ABC transporter. (258 aa)
SCO7182SC8A11.10, probable branched amino acid transport system ATP-binding protein, len: 237 aa; similar to SW:LIVF_ECOLI (EMBL:J05516) Escherichia coli high-affinity branched-chain amino acid transport ATP-binding protein LivF, 237 aa; fasta scores: opt: 687 z-score: 739.1 E(): 0; 50.7% identity in 223 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. (237 aa)
SCO7181SC8A11.09, probable branched amino acid transport system ATP-binding protein, len: 261 aa; similar to SW:LIVG_ECOLI (EMBL:J05516) Escherichia coli high-affinity branched-chain amino acid transport ATP-binding protein LivG, 255 aa; fasta scores: opt: 586 z-score: 615.7 E(): 7.9e-27; 41.6% identity in 250 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop). (261 aa)
SCO7008Putative ABC-transport protein; SC8F11.34, possible ABC-transport protein, len: 624. This protein contains a hydrophobic membrane spanning N-terminal domain and an ATP-binding C-terminal domain. Similar to many Eukaryotic and Prokaryotic putative transport proteins including: Drosophila melanogaster TR:O46057(EMBL:AL009147) EG:171D11.2 transporter protein (609 aa), fasta scores opt: 777 z-score: 850.8 E(): 0 31.0% identity in 597 aa overlap and Streptomyces coelicolor TR:Q9Z4Z6(EMBL:AL035707) putative ABC transporter, SCE29.04C (615 aa), fasta scores opt: 957 z-score: 1047.3 E():0 35.1 [...] (624 aa)
SCO6981SC8F11.07, probable ABC transport protein, ATP-binding component, len: 330 aa. Highly similar to many including: Bacillus subtilis SW:RBSA_BACSU(EMBL:Z25798) ribose transport ATP-binding protein, RbsA (453 aa), fasta scores opt: 489 z-score: 537.5 E(): 1.6e-22 31.0% identity in 239 aa overlap and Streptomyces coelicolor TR:CAB60178(EMBL:AL132824) probable ABC sugar transport ATP binding protein, SCAH10.24(263 aa), fasta scores opt: 1171 z-score: 1281.9 E():0 68.0% identity in 256 aa overlap. Contains a Prosite hits to PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transp [...] (330 aa)
SCO6814SC1A2.23c, possible ABC transport protein ATP-binding component, len: 223 aa. Similar to many ABC transporters including: Deinococcus radiodurans TR:AAF12204 (EMBL:AE001862) phosphate ABC transporter, ATP-binding protein (254 aa), fasta scores opt: 458 z-score: 524.0 E(): 8.7e-22 38.1% identity in 210 aa overlap and Escherichia coli SW:PSTB_ECOLI (EMBL:X02723) phosphate ABC transporter, ATP-binding protein, PstB(257 aa), fasta scores opt: 436 z-score: 499.3 E(): 2.1e-20 38.9% identity in 198 aa overlap. Contains Prosite hits to PS00211 ABC transporters family signature and PS00017 ATP/ [...] (223 aa)
SCO6758SC6A5.07, probable ABC transporter ATP-binding component, len: 253aa; similar to many eg. SW:TAGH_BACSU TagH, ABC transporter ATP-binding component from Bacillus subtilis (527 aa) fasta scores; opt: 621, z-score: 686.7, E(): 6e-31, (48.5% identity in 202 aa overlap). Contains Pfam match to entry PF00005 ABC_tran, ABC transporter, score 123.70, E-value 3.4e-33 and Prosite matches to PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. (253 aa)
SCO6742SC5F2A.25, probable ABC transporter, len: 547aa; similar to many eg. TR:Q53912 (EMBL:X84374) Ard1, ABC transporter which confers resistance to the aminonucleoside antibiotic A201A in Streptomyces capreolus (558 aa) fasta scores; opt: 1561, z-score: 1661.3, E(): 0, (46.7% identity in 542 aa overlap). Contains two Pfam matches to entry PF00005 ABC_tran, ABC transporter, two Prosite matches to PS00017 ATP/GTP-binding site motif A (P-loop) and Prosite match to PS00211 ABC transporters family signature. (547 aa)
SCO6720SC5F2A.03c, probable ABC transporter, len: 544aa; similar to many involved in antibiotic resistance egs. TR:Q54381 (EMBL:X79146) from the lincomycin-production gene cluster of Streptomyces lincolnensis 78-11 (578 aa) fasta scores; opt: 1624, z-score: 1696.3, E(): 0, (50.3% identity in 541 aa overlap). Contains two Pfam matches to entry PF00005 ABC_tran, ABC transporter, two Prosite matches to PS00017 ATP/GTP-binding site motif A (P-loop) and Prosite match to PS00211 ABC transporters family signature. Also contains a possible coiled-coil region around 250aa. (544 aa)
SCO6719SC5F2A.02c, UvrA-like ABC transporter, len: 752 aa; similar to many egs. TR:O86699 (EMBL:AL031515) UvrA-like protein from Streptomyces coelicolor (796 aa) fasta scores; opt: 2047, z-score: 2164.0, E(): 0, (51.9% identity in 776 aa overlap) and SW:UVRA_ECOLI UvrA, excinuclease ABC subunit A from Escherichia coli (940 aa) fasta scores; opt: 634, z-score: 669.2, E(): 5.8e-30, (33.9% identity in 938 aa overlap). Contains two Pfam matches to entry PF00005 ABC_tran, ABC transporter and two Prosite matches to PS00017 ATP/GTP-binding site motif A (P-loop). Also contains possible membrane spann [...] (752 aa)
SCO6684Putative ABC transporter; Probably involved in exporting SapB from the cell (Probable). Expression of the ram locus (ramA, ramB and ramR) induces rapid aerial mycelium formation in S.lividans. Belongs to the ABC transporter superfamily. (608 aa)
SCO6683Putative ABC transporter; Probably involved in exporting SapB from the cell (Probable). Expression of the ram locus (ramA, ramB and ramR) induces rapid aerial mycelium formation in S.lividans. Belongs to the ABC transporter superfamily. (636 aa)
SCO6677SC5A7.27c, probable ABC transporter ATP-binding protein, len: 180 aa; similar to part of many e.g. taurine transport atp-binding protein tauB (255 aa), fasta scores; opt: 309 z-score: 436.0 E(): 4.9e-17, 43.6% identity in 117 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporters, score 31.20, E-value 1.9e-09. Has large overlap with convergent downstream gene; database similarities do not extend into the overlap. The sequence of the cosmid has been checked, and is correct. (180 aa)
SCO6567SC3F9.02, ABC transporter ATP binding protein, len:505 aa; similar to many sugar transport proteins e.g. ARAG_ECOLI l-arabinose transport atp-binding protein (504 aa), fasta scores; opt: 1312 z-score: 1412.8 E(): 0, 42.1% identity in 501 aa overlap andRBSA_HAEIN ribose transport atp-binding protein rbsA (493 aa), fasta scores; opt: 1160 z-score: 1216.7 E(): 0, 40.7% identity in 489 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop), PS00211 ABC transporters family signature and Pfam match to entry ABC_tran PF00005, ABC transporters, score 197.70. (505 aa)
SCO6517SC5C7.02, uvrA-like protein, len: 796 aa; similar to Streptomyces peucetius TR:Q54827 (EMBL:L76359) daunorubicin resistance protein drrC (764 aa), fasta scores; opt: 2051 z-score: 2702.2 E(): 0, 51.1% identity in 775 aa overlap, and to many uvrA proteins e.g. UVRA_NEIGO excinuclease ABC subunit A (950 aa), fasta scores; opt: 412 z-score: 1697.0 E(): 0, 34.1% identity in 953 aa overlap. Contains 2x PS00017 ATP /GTP-binding= match to entry PF00005 ABC_tran, ABC transporters, scores 42.40, E-value 1.7e-10 and 71.20, E-value 2.2e-17. (796 aa)
SCO6512SC1E6.21, probable ABC transporter ATP-binding protein, len: 539 aa; similar to many e.g. TLRC_STRFR tylosin resistance ATP-binding protein TLRC (548 aa), fasta scores; opt: 449 z-score: 533.0 E(): 2.1e-22, 33.0% identity in 542 aa overlap. Contains 2x PS00017 ATP. (539 aa)
SCO6455SC9B5.22, probable ABC transporter ATP-binding protein, len: 222aa; fifth of a five gene operon probably involved in peptide uptake, similar to many eg. SW:OPPF_SALTY oligopeptide transport ATP-binding protein, OppF, from Salmonella typhimurium (334 aa) fasta scores: opt: 412, z-score: 569.7, E(): 1.9e-24, (35.1% identity in 194 aa overlap). Contains PS00017 ATP /GTP-binding site motif A (P-loop). Also contains Pfam match to entry PF00005 ABC_tran, ABC transporters. (222 aa)
SCO6454SC9B5.21, probable ABC transporter ATP-binding protein, len: 335aa; fourth of a five gene operon probably involved in peptide uptake, similar to many eg. SW:DPPD_BACSU dipeptide transport ATP-binding protein, DppD, from Bacillus subtilis (335 aa) fasta scores: opt: 486, z-score: 654.6, E(): 3.6e-29, (37.6% identity in 348 aa overlap). Contains PS00017 ATP /GTP-binding site motif A (P-loop). Also contains Pfam match to entry PF00005 ABC_tran, ABC transporters. (335 aa)
SCO6367SC4A2.03c, probable ABC transporter ATP-binding protein, len: 245 aa; similar to many e.g. YF08_METJA hypothetical ABC transporter ATP-binding protein (224 aa), fasta scores; opt: 522 z-score: 604.9 E(): 1.9e-26, 40.6% identity in 219 aa overlap. Contains PS00017 ATP. (245 aa)
SCO6366SC4A2.02c, probable ABC transporter ATP-binding protein, len: 229 aa; similar to many e.g. CYSA_SYNP7 sulfate transport atp-binding protein cysA (344 aa), fasta scores; opt: 422 z-score: 523.3 E(): 6.7e-22, 44.9% identity in 176 aa overlap. Contains PS00017 ATP. (229 aa)
SCO6360SC3A7.28, probable ABC transporter ATP-binding protein, similar to many, e.g. BCRA_BACLI bacitracin transport ATP-binding protein bcrA (306 aa), fasta scores; opt: 540 z-score: 640.6 E(): 2e-28, 34.9% identity in 298 aa overlap. Contains PS00017 ATP /GTP-binding site motif A (P-loop) and Pfam match to entry PF00005 ABC_tran, ABC transporters, score 137.30, E-value 2.7e-37. (312 aa)
SCO6295SCBAC8D1.08, possible ABC transporter ATP-binding protein, len: 662 aa; similar to TR:Q9KKV4 (EMBL:AE004426) Vibrio cholerae ABC transporter ATP-binding protein VCA0996, 619 aa; fasta scores: opt: 1081 Z-score: 1044.0 bits: 203.4 E(): 1.4e-50; 35.859% identity in 594 aa overlap. Contains Pfam matches to entries PF00664 ABC_membrane, ABC transporter transmembrane region and PF00005 ABC_tran, ABC transporter and matches to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop), PS00211 ABC transporters family signature and PS00339 Aminoacyl-transfer RNA synthetases class-II signatur [...] (662 aa)
SCO6259SCAH10.24, probable ABC sugar transport ATP binding protein, len: 263 aa; similar to TR:O68121 (EMBL:AF010496) Rhodobacter capsulatus ribose transport ATP-binding protein, 305 aa; fasta scores: opt: 612 z-score: 706.1 E(): 5.9e-32; 45.6% identity in 217 aa overlap, to SW:RBSA_ECOLI (EMBL:M13169) Escherichia coli, ribose transport ATP-binding protein RbsA, 501 aa; fasta scores: opt: 509 z-score: 585.6 E(): 3e-25; 31.5% identity in 254 aa overlap and to TR:CAA15787 (EMBL:SC7B7) Streptomyces coelicolor St7B7.07, 260 aa; fasta scores: opt: 592 z-score: 521.2 E(): 1e-23; 43.1% identity in 2 [...] (263 aa)
SCO6111SCBAC1A6.35c, probable oligopeptide ABC transporter ATP-binding protein, len: 585 aa; similar to SW:YLIA_ECOLI (EMBL:AE000185) Escherichia coli hypothetical ABC transporter ATP-binding protein YliA, 629 aa; fasta scores: opt: 1480 z-score: 1352.7 E(): 0; 44.5% identity in 580 aa overlap and N- and C-terminal regions both similar to SW:OPPD_BACSU (EMBL:X56347) Bacillus subtilis oligopeptide transport ATP-binding protein OppD, 358 aa; fasta scores: opt: 864 z-score: 796.4 E(): 0; 49.6% identity in 274 aa overlap. Contains 2x Pfam matches to entry PF00005 ABC_tran, ABC transporter and mat [...] (585 aa)
SCO6095SCBAC1A6.19c, probable ABC transporter ATP-binding protein, len: 264 aa; similar to SW:SSUB_BACSU (EMBL:Z93102) Bacillus subtilis putative aliphatic sulfonates transport ATP-binding protein SsuB, 274 aa; fasta scores: opt: 628 z-score: 728.2 E(): 0; 46.1% identity in 217 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. (264 aa)
SCO6062SC9B1.09, ABC transporter ATP-binding subunit, len: 386aa; similar to many eg. TR:O69724 (EMBL:AL022121) putative ABC transporter ATP-binding subunit from Mycobacterium tuberculosis (376 aa) fasta scores; opt: 1147, z-score: 1185.4, E(): 0, (51.2% identity in 371 aa overlap) and SW:PROV_BACSU glycine betaine/L-proline transport ATP-binding protein (404 aa) fasta scores; opt: 849, z-score: 879.1, E(): 0, (39.8% identity in 359 aa overlap). Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and Prosite matches to PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC t [...] (386 aa)
SCO6047SC1B5.07, probable ABC-transporter ATP-binding protein, len: 284 aa; similar to many e.g. NOSF_PSEST P19844 pseudomonas stutzeri copper transport atp-binding protein nosF (308 aa), fasta scores; opt: 327 z-score: 381.3 E(): 5.2e-14, 30.5% identity in 292 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop) and Pfam match to entry ABC_tran PF00005, ABC transporters, score 126.83. (284 aa)
SCO6010SC7B7.07, probable ABC-transport system ATP binding protein, len: 260 aa; similar to many eg. XYLG_ECOLI P37388 d-xylose transport atp-binding protein (513 aa), fasta scores; opt: 567 z-score: 580.0 E(): 3.8e-25, 36.5% identity in 255 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. Possible alternative start 9 bp upstream. (260 aa)
SCO5958Cobalt transport system ATP binding protein; Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity). (284 aa)
SCO5923SC10A5.28c, ABC-transporter ATP-binding protein, len : 361 aa; similar to many eg. Streptomyces reticuli TR:P964 83 (EMBL:Y08921) MSIK PROTEIN involved in in cellobiose and maltose transport(377 aa), opt: 809 z-score: 1069.1 E(): 0, 40.4% identity in 381 aa overlap. Contains PS00017 ATP/GT P-binding site motif A (P-loop). PS00211 ABC transporters f amily signature and Pfam match to entry ABC_tran PF00005, A BC transporters, score 35.90. (361 aa)
SCO5870SC2E9.11, probable ABC-transporter ATP binding protein, len: 230 aa; highly similar to many eg. Y796_METJA Q58206 hypothetical abc transporter atp-binding protein (235 aa), fasta scores; opt: 666 z-score: 870.6 E(): 0, 43.8% identity in 226 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop), PS00211 ABC transporters family signature and Pfam match to entry ABC_tran PF00005, ABC transporters, score 54.33. (230 aa)
SCO5818SC5B8.08, probable ABC transporter, len: 744 aa; N-t erminus is similar to several ABC transporters e.g. NODI_RH IGA P50332 from Rhizobium galegae nodulation atp-binding pr otein (347 aa), fasta scores; opt: 285 z-score: 225.2 E():2 .4e-05, 34.5% identity in 197 aa overlap, and contains PS00 017 ATP/GTP-binding site motif A (P-loop) and Pfam match to entry ABC_tran PF00005, ABC transporters, score 135.08. Th e C-terminus (approx aa 500-744) contains several probable transmembrane domains. In the centre is a repetitive region containing 10 copies of a degenerate 7 aa Proline-rich rep eat. (744 aa)
SCO5777SC4H8.16c, gluA, probable glutamate uptake system ATP-binding protein, len: 258 aa; highly similar to many amino-acid uptake ATP-binding proteins eg. GLUA_CORGL P48243 glutamate transport atp-binding protein from Corynebacterium gluamicum (242 aa), fasta scores; opt: 1152 z-score: 1564.5 E(): 0, 71.5% identity in 242 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. (258 aa)
SCO5713SC9F2.03, possible peptide transport ATP-binding protein, len: 393aa; similar to many (confirmed and proposed) eg. SW:OPPD_ECOLI oligopeptide transport ATP-binding protein from Escherichia coli (337 aa) fasta scores; opt: 870, z-score: 693.2, E(): 2.7e-31, (44.1% identity in 311 aa overlap).Contains PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. Also similar to the gene immediately downstream (SC9F2.04) suggesting a local duplication event fasta scores; opt: 722, z-score: 477.4, E(): 9.4e-22, (42.8% identity in 327 aa overlap). Also contain [...] (398 aa)
SCO5712SC9F2.04, possible peptide transport ATP-binding protein, len: 359aa; similar to many eg. SW:APPF_BACSU oligopeptide transport ATP-binding protein from Bacillus subtilis (329 aa) fasta scores; opt: 798, z-score: 814.6, E(): 0, (41.2% identity in 330 aa overlap). Also similar to TR:O86575 (EMBL:AL031184) oligopeptide ABC transporter ATP-binding protein from Streptomyces coelicolor (496 aa) fasta scores; opt: 861, z-score: 875.6, E(): 0, (42.0% identity in 357 aa overlap). Contains PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. Also similar t [...] (359 aa)
SCO5668Putative polyamine ABC-transporter ATP-binding p rotein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (397 aa)
SCO5654SC6A9.13, probable ABC transporter ATP-binding protein, len: 258 aa; similar to many e.g. YBBA_ECOLI hypothetical ABC transporter ATP-binding protein (228 aa), fasta scores; opt: 462 z-score: 578.7 E(): 5.3e-25, 40.4% identity in 198 aa overlap. Contains PS00017 ATP. (258 aa)
SCO5648ABC transporter ATP binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system. (348 aa)
SCO5480SC2A11.14, probable oligopeptide ABC transporter ATP-binding protein, len: 496 aa; similar to many e.g. APPF_BACSU oligopeptide transport ATP-binding protein (329 aa), fasta scores; opt: 1284 z-score: 1056.3 E(): 0, 56.4% identity in 326 aa overlap Also similar to S. coelicolor TR:P72410 (EMBL:U68036) bldKE (284 aa), fasta scores; opt: 1114 z-score: 1091.6 E(): 0, 59.3% identity in 280 aa overlap. Contains PS00017 ATP /GTP-binding site motif A (P-loop), PS00211 ABC transporters family signature and Pfam match to entry PF00005 ABC_tran, ABC transporters, score 202.90, E-value 4.8e-57. C [...] (496 aa)
SCO5479SC2A11.13, probable oligopeptide ABC transporter ATP-binding protein, len: 365 aa; similar to many e.g. OPPD_BACSU oligopeptide transport ATP-binding protein (336 aa), fasta scores; opt: 1089 z-score: 1413.1 E(): 0, 52.3% identity in 323 aa overlap Also similar to S. coelicolor TR:P72409 (EMBL:U68036) bldKD (353 aa), fasta scores; opt: 1396 z-score: 1731.9 E(): 0, 58.4% identity in 365 aa overlap. Contains PS00017 ATP /GTP-binding site motif A (P-loop), PS00211 ABC transporters family signature and Pfam match to entry PF00005 ABC_tran, ABC transporters, score 203.50, E-value 3.3e-57. (365 aa)
SCO5452SC3D11.09, probable ABC transporter, ATP-binding subunit, len: 312aa; similar to many eg. TR:Q9XAC8 (EMBL:AL096839) putative ABC transporter, ATP-binding subunit from Streptomyces coelicolor (307 aa) fasta scores; opt: 713, z-score: 795.0, E(): 0, 43.5% identity in 299 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter, Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. (312 aa)
SCO5451SC3D11.08c, probable ABC transporter, len: 660aa; similar to many eg. TRNEW:CAB66302 (EMBL:AL136519) ABC transporter protein, ATP-binding component from Streptomyces coelicolor (1243 aa) fasta scores; opt: 682, z-score: 703.6, E(): 8.8e-32, 34.4% identity in 608 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter, Pfam match to entry PF00664 ABC_membrane, ABC transporter transmembrane region, Prosite match to PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop). (660 aa)
SCO5450SC3D11.07c, probable ABC transporter, len: 627aa; similar to many eg. TRNEW:CAB66302 (EMBL:AL136519) ABC transporter protein, ATP-binding component from Streptomyces coelicolor (1243 aa) fasta scores; opt: 1238, z-score: 1250.8, E(): 0, 38.7% identity in 633 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter, Pfam match to entry PF00664 ABC_membrane, ABC transporter transmembrane region, Prosite match to PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop). (627 aa)
SCO5449SC3D11.06c, probable ABC transporter, len: 605aa; similar to many eg. TR:Q54203 (EMBL:X89010) from the 5'-hydroxystreptomycin production/transport operon of Streptomyces glaucescens (584 aa) fasta scores; opt: 885, z-score: 878.4, E(): 0, 40.3% identity in 601 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter, Pfam match to entry PF00664 ABC_membrane, ABC transporter transmembrane region and Prosite match to PS00211 ABC transporters family signature. (605 aa)
SCO5448SC3D11.05c, probable ABC transporter, len: 583aa; similar to many eg. TR:Q54204 (EMBL:X89010) from the 5'-hydroxystreptomycin production/transport operon of Streptomyces glaucescens (591 aa) fasta scores; opt: 1687, z-score: 1814.2, E(): 0, 49.3% identity in 564 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter, Pfam match to entry PF00664 ABC_membrane, ABC transporter transmembrane region and Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop). (583 aa)
SCO53952SC6G5.39c, possible ABC transporter ATP-binding subunit, len: 346aa; similar to many eg. TR:Q9S6T6 (EMBL:AL035654) putative ABC transporter ATP-binding protein from Streptomyces coelicolor (317 aa) fasta scores; opt: 1180, z-score: 1223.8, E(): 0, 58.5% identity in 316 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop). (346 aa)
SCO53932SC6G5.37c, possible ABC transporter ATP-binding subunit, len: 423aa; similar to many eg. TR:Q9S6T6 (EMBL:AL035654) putative ABC transporter ATP-binding protein from Streptomyces coelicolor (317 aa) fasta scores; opt: 1132, z-score: 771.9, E(): 0, 60.2% identity in 309 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop). (423 aa)
SCO53832SC6G5.27c, possible ABC transporter, ATP-binding subunit, len: 260aa; similar to many eg. TR:Q53626 (EMBL:U43537) ATP-binding protein involved in mithramycin resistance from Streptomyces argillaceus (320 aa) fasta scores; opt: 901, z-score: 998.1, E():0, 59.6% identity in 225 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter, Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop) and Prosite match to PS00211 ABC transporters family signature. (260 aa)
SCO52582SC7G11.20c, atrC, ATP-binding protein, len: 253 aa; previously sequenced as TR:Q9RGW6 (EMBL:AF104994) Streptomyces coelicolor A3(2) ATP-binding protein AtrC, 239 aa. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. (253 aa)
SCO5129SC9E12.14, possible ABC transporter ATP-binding protein, len: 318 aa; similar to TR:CAB88183 (EMBL:AL352972) Streptomyces coelicolor putative ABC transporter ATP-binding protein SCC30.13, 308 aa; fasta scores: opt: 861 z-score: 926.3 E(): 0; 54.4% identity in 309 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. (318 aa)
SCO5121SC9E12.06, probable peptide transport system ATP-binding protein, len: 356 aa; similar to SW:APPF_BACSU (EMBL:U20909) Bacillus subtilis oligopeptide transport ATP-binding protein AppF, 329 aa; fasta scores: opt: 1255 z-score: 1332.6 E(): 0; 57.3% identity in 335 aa overlap, to TR:P72410 (EMBL:U68036) Streptomyces coelicolor putative ABC transporter intracellular ATPase subunit BldKE (fragment), 284 aa; fasta scores: opt: 999 z-score: 1063.6 E(): 0; 58.1% identity in 260 aa overlap and to TR:O86575 (EMBL:AL031184) Streptomyces coelicolor oligopeptide ABC transporter ATP-binding protein [...] (356 aa)
SCO5120SC9E12.05, probable peptide transport system ATP-binding protein, len: 327 aa; similar to SW:OPPD_BACSU (EMBL:X56347) Bacillus subtilis oligopeptide transport system ATP-binding protein OppD, 358 aa; fasta scores: opt: 1126 z-score: 1167.7 E(): 0; 53.9% identity in 310 aa overlap, to TR:P72409 (EMBL:U68036) Streptomyces coelicolor putative ABC transporter intracellular ATPase subunit BldKD, 353 aa; fasta scores: opt: 1035 z-score: 1074.2 E(): 0; 51.5% identity in 326 aa overlap and to TR:O86574 (EMBL:AL031184) Streptomyces coelicolor oligopeptide ABC transporter ATP-binding protein SC2 [...] (327 aa)
SCO5116SC9E12.01, probable peptide transport system ATP-binding protein (fragment), len: >142 aa; similar to SW:OPPF_ECOLI (EMBL:AE000223) Escherichia coli oligopeptide transport protein ATP-binding protein OppF, 334 aa; fasta scores: opt: 344 z-score: 423.0 E(): 4.3e-16; 56.5% identity in 92 aa overlap and to TR:O86575 (EMBL:AL031184) Streptomyces coelicolor oligopeptide ABC transporter ATP-binding protein SC2A11.14, 496 aa; fasta scores: opt: 488 z-score: 576.6 E(): 1.7e-26; 56.6% identity in 136 aa overlap; SCBAC31E11.12, bldKE, putative ABC transporter intracellular ATPase subunit (fragme [...] (381 aa)
SCO5115SCBAC31E11.11, bldKD, putative ABC transporter intracellular ATPase subunit, len: 353 aa; almost identical to previously sequenced TR:P72409 (EMBL:U680360) Streptomyces coelicolor BldKD putative ABC transporter intracellular ATPase subunit, 353 aa and similar to TR:O86574 (EMBL:AL031184) Streptomyces coelicolor SC2A11.13, 366 aa; fasta scores: opt: 1427 Z-score: 1344.1 bits: 257.3 E(): 3.8e-69; 60.340% identity in 353 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transp [...] (353 aa)
SCO5035SCK7.08c, possible ABC transporter ATP-binding protein, len: 229 aa; similar to TR:CAB81857 (EMBL:AL161691) Streptomyces coelicolor putative ABC transporter ATP-binding protein SCD40A.12c, 246 aa; fasta scores: opt: 597 z-score: 668.0 E(): 9.7e-30; 47.6% identity in 206 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop). (229 aa)
SCO49632SCK31.23, possible ABC transporter ATP-binding protein, len: 335 aa; similar to TR:CAC08315 (EMBL:AL392149) Streptomyces coelicolor putative ABC transport system ATP-binding protein SCD19A.14, 336 aa; fasta scores: opt: 1211 z-score: 1254.5 E(): 0; 58.2% identity in 330 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. (335 aa)
SCO4936SCK13.28, possible ABC transporter ATP-binding protein, len: 227 aa; similar to TR:Q9KRR8 (EMBL:AE004234) Vibrio cholerae ABC transporter, ATP-binding protein VC1568, 233 aa; fasta scores: opt: 746 z-score: 833.1 E(): 0; 51.1% identity in 223 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. (227 aa)
SCO48862SCK8.12, probable sugar ABC transporter ATP-binding protein, len: 537 aa; similar to SW:MGLA_ECOLI (EMBL:M59444) Escherichia coli galactoside transport ATP-binding protein MglA, 506 aa; fasta scores: opt: 1019 z-score: 1013.7 E(): 0; 35.6% identity in 486 aa overlap. Contains 2x Pfam matches to entry PF00005 ABC_tran, ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. (537 aa)
SCO4830SC2A6.15, probable glycine betaine ABC transport system ATP-binding protein, len: 394 aa; similar to SW:OPAA_BACSU (EMBL:U17292) Bacillus subtilis glycine betaine transport ATP-binding protein OpuAa, 418 aa; fasta scores: opt: 1015 z-score: 1043.6 E(): 0; 48.5% identity in 338 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. (394 aa)
SCO4666SCD840A.12c, possible ABC-transporter ATP-binding protein, len: 246 aa; similar to TR:Q9XAA7 (EMBL:AL096837) Streptomyces coelicolor putative ABC-transporter ATP-binding protein SCF43A.08, 264 aa; fasta scores: opt: 984 z-score: 1127.0 E(): 0; 64.0% identity in 239 aa overlap and to TR:CAB76999 (EMBL:AL159178) Streptomyces coelicolor putative ABC transporter ATP-binding protein SCH22A.30, 252 aa; fasta scores: opt: 907 z-score: 718.9 E(): 1.5e-34; 61.0% identity in 236 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and matches to Prosite entries PS00017 ATP/ [...] (246 aa)
SCO4585SCD20.03, probable ABC transporter ATP-binding protein, len: 327 aa; similar to SW:BCRA_BACLI (EMBL:L20573) Bacillus licheniformis bacitracin transport ATP-binding protein BcrA, 306 aa; fasta scores: opt: 636 z-score: 662.0 E(): 2.1e-29; 39.6% identity in 308 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. (327 aa)
SCO4405SC6F11.03c, probable ABC transport system ATP-binding protein, len: 324 aa; similar to SW:DRRA_STRPE (EMBL:M73758) Streptomyces peucetius daunorubicin resistance ATP-binding protein DrrA, 330 aa; fasta scores: opt: 857 z-score: 908.1 E(): 0; 45.3% identity in 322 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. (324 aa)
SCO4397SCD10.29c, probable ABC transport system ATP-binding protein, len: 263 aa; similar to TR:Q9WZQ0 (EMBL:AE001747) Thermotoga maritima ABC transporter ATP-binding protein TM0793, 260 aa; fasta scores: opt: 591 z-score: 670.1 E(): 7.6e-30; 36.9% identity in 244 aa overlap and to SW:DRRA_STRPE (EMBL:M73758) Streptomyces peucetius daunorubicin resistance ATP-binding protein DrrA, 330 aa; fasta scores: opt: 551 z-score: 623.8 E(): 2.8e-27; 39.1% identity in 225 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and match to Prosite entry PS00017 ATP/GTP-binding site mo [...] (263 aa)
SCO4359SCD19.14, probable ABC transport system ATP-binding protein, len: 336 aa; similar to SW:DRRA_STRPE (EMBL:M73758) Streptomyces peucetius daunorubicin resistance ATP-binding protein DrrA, 330 aa; fasta scores: opt: 912 z-score: 964.7 E(): 0; 49.5% identity in 327 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. (336 aa)
SCO4240ABC transporter ATP-binding protein; Part of the ABC transporter complexes DasABC-MsiK and NgcEFG- MsiK involved in N,N'-diacetylchitobiose ((GlcNAc)2) uptake. Responsible for energy coupling to the transport system. (378 aa)
SCO4148SCD84.15, probable ABC transport system ATP-binding protein, len: 289 aa; similar to TR:AAF23811 (EMBL:AF213822) Zymomonas mobilis ABC binding protein, 298 aa; fasta scores: opt: 607 z-score: 650.5 E(): 8.9e-29; 38.6% identity in 285 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. (289 aa)
SCO4139Phosphate ABC transport system ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (258 aa)
SCO4075SCD25.11c, ABC transport protein, ATP-binding subunit, len: 326 aa. Identical to Streptomyces lividans TR:Q04324 (EMBL; X58873) hypothetical 35.0 KD protein in tRNA-glyU beta gene region (326 aa), fasta scores opt: 2092 z-score: 2329.9 E(): 0 100.0% identity in 326 aa overlap and Streptomyces coelicolor proteins TR:CAB50753 (EMBL; AL096839) putative ABC transporter, ATP-binding subunit SCC22.10 (307 aa), fasta scores opt: 648 z-score: 727.6 E(): 0 42.1% identity in 309 aa overlap and TR:CAB42771 (EMBL; AL049841) putative ABC transporter, ATP-binding subunit SCI11.08 (315 aa), fasta sco [...] (326 aa)
SCO3958SCD78.25, ABC transporter ATP-binding protein, len: 303 aa; similar to TR:Q45404 (EMBL:U09819) SpaFABC transporter ATP-binding protein (247 aa) from Bacillus subtilis, fasta scores;opt: 524, z-score: 615.6, E(): 4.8e-27, (39.3% identity in 234 aa overlap). Contains Pfam match to entry PF00005 ABC_tran, ABC transporters, score 161.50, E-value 1.4e-44 and Prosite matches to PS00017 ATP. (303 aa)
SCO3956SCD78.23, putative ABC transporter ATP-binding protein, similar to YHCH_BACSU (EMBL:X96983) hypothetical ABC transporter ATP-binding protein from Bacillus subtilis, fasta scores; opt: 438, z-score: 522.7, E(): 7.2e-22, (33.6% identity in 220 aa overlap) and YHIH_ECOLI (EMBL:U00039) ABC transporter ATP-binding protein from Escherichia coli fasta scores; opt: 445, z-score: 530.5, E(): 2.6e-22, (30.7% identity in 287 aa overlap). Contains Pfam match to entry PF00005 ABC_tran, ABC transporters, score 183.40, E-value 3.8e-51 and PS00017 ATP /GTP-binding site motif A (P-loop). (320 aa)
SCO3947SCD78.14, cydCD, probable ABC transporter, len: 1172 aa; N-terminal similarity to CYDD_ECOLI (EMBL:L21749) ABC transporter ATP-binding protein from Escherichia coli (588 aa), fasta scores; opt: 736, z-score: 950.9, E(): 0, (39.2% identity in525 aa overlap) and CYDC_BACSU (EMBL :D83026) ABC transporter ATP-binding protein from Bacillus subtilis (567 aa), fasta scores; opt: 1174, z-score:949.4, E(): 0 (36.0% identity in 566 aa overlap). Also has full length similarity to MDR4_DROME (EMBL:M59076) multidrug resistance protein homolog from Drosophila melanogaster fasta scores; opt: 575,z-sc [...] (1172 aa)
SCO3824SCGD3.25, probable ABC-transporter ATP-binding component, len: 342 aa; may be involved in antibiotic resistance by acting as an efflux pump, highly similar to to many ABC-tranporter ATP-binding components (especially those involved in antibiotic transport) e.g. TR:O86916 (EMBL:Y15759) Streptomyces rochei ABC-tranporter which induces multidrug resistance (363 aa), fasta scores; opt: 1635 z-score: 1717.7 E(): 0, 77.6% identity in 340 aa overlap. Similar to many from S.coelicolor e.g. (EMBL:AL049841), SCE9.25c, S.coelicolor probable ABC transporter ATP-binding component (315 aa) (53.2% id [...] (342 aa)
SCO3755SCH63.02c, possible ABC transport system ATP binding protein, len: 164 aa; similar to TR:CAB81857 (EMBL:AL161691) Streptomyces coelicolor putative ABC-transporter ATP binding protein SCD40A.12c, 246 aa; fasta scores: opt: 1007 z-score: 1087.6 E(): 0; 67.4% identity in 236 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. (264 aa)
SCO3752SCH22A.30, possible ABC transporter ATP-binding protein, len: 252 aa; similar to TR:Q9XAA7 (EMBL:AL096837) Streptomyces coelicolor putative ABC transporter ATP-binding protein SCF43A.08, 264 aa; fasta scores: opt: 848 z-score: 944.8 E(): 0; 56.0% identity in 243 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and match to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. (252 aa)
SCO3706SCH35.18c, probable ABC transporter ATP-binding subunit, len: 374aa; similar to many egs. TR:O31231 (EMBL:Y10817) from Arthrobacter nicotinovorans (349 aa) fasta scores; opt: 816, z-score: 875.0, E(): 0, (43.2% identity in 340 aa overlap) and TR:O86751 (EMBL:AL031035) putative ABC transporter ATP-binding subunit from Streptomyces coelicolor (348 aa) fasta scores; opt: 653, z-score: 701.9, E(): 9e-32, (38.6% identity in 321 aa overlap). Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and Prosite matches to PS00211 ABC transporters family signature and PS00017 ATP/GTP-bind [...] (374 aa)
SCO3633SCH10.11, probable ABC transporter ATP-binding protein, len: 311 aa; similar to many e.g. TR:Q54406 (EMBL:X73633), tnrB2, from Streptomyces longisporoflavus, which is a component of an ABC transport system which confers resistance to the polyether-ionophore antibiotic tetronasin (300 aa), fasta scores; opt: 1323 z-score: 1477.2 E(): 0, 67.5% identity in 305 aa overlap. Also similar to TR:O86311 (EMBL:Z93777) M.tuberculosis hypothetical protein (311 aa) (63.0% identity in 305 aa overlap). Similar to many putative ABC transporter ATP-binding proteins from Streptomyces coelicolor e.g. SCD [...] (311 aa)
SCO3453SCE46.10c, probable ABC-transporter ATP binding protein, len: 354 aa; similar to TR:CAB49712 (EMBL:AJ248285) Pyrococcus abyssi ABC-transporter ATP binding protein, 329 aa; fasta scores opt: 708 z-score: 742.4 E(): 0; 43.9% identity in 280 aa overlap and to SW:CYSA_ECOLI (EMBL:M32101) Escherichia coli sulfate transport ATP-binding protein CysA, 365 aa; fasta scores: opt: 668 z-score: 700.3 E(): 1.2e-31; 38.6% identity in 332 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and two matches to Prosite entries PS00211 ABC transporters family signature and PS00017 [...] (354 aa)
SCO3418SCE9.25c, probable ABC transporter ATP-binding component, len: 315 aa; similar to many e.g SW:DRRA_STRPE (EMBL:M73758), drrA, Streptomyces peucetius daunorubicin resistance ATP-binding protein (330 aa), fasta scores; opt: 942 z-score: 1020.6 E(): 0, 51.4% identity in 317 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter, score 187.90, E-value 1.6e-52, PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop). (315 aa)
SCO3339SCE7.06c, probable ABC transporter ATP-binding subunit, len: 276aa; similar to many eg. TR:O33189 (EMBL:Z98268) ABC-type transport protein from Mycobacterium tuberculosis (255 aa) fasta scores; opt: 811, z-score: 850.0, E(): 0, (53.8% identity in 251 aa overlap) and TR:Q53626 (EMBL:U43537) ABC protein in mithramycin resistance (320 aa) fasta scores; opt: 491, z-score: 517.8, E(): 1.6e-21, (37.0% identity in 230 aa overlap). Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and Prosite matches to PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site mot [...] (276 aa)
SCO3235SCE29.04c, probable ABC transporter, len: 615aa; similar to many eg. TR:D1035364 (EMBL:AB019513) ABC transporter from Streptomyces coelicolor fasta scores; opt: 783, z-score: 794.3, E(): 0, (42.8% identity in 596 aa overlap). C-terminal half contains Pfam match to entry PF00005 ABC_tran, ABC transporter (score 184.50, E-value 1.7e-51) which itself contains Prosite matches to PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop). N-terminal half contains Pfam match to entry PF00664 ABC_membrane, ABC transporter transmembrane region., score 129.80, E [...] (615 aa)
SCO3224SCE8.17c, probable ABC transporter ATP-binding protein, len: 317aa; similar to many egs. TR:O86629 (EMBL:AL031155) ABC transporter ATP-binding protein from Streptomyces coelicolor (312 aa) fasta scores; opt: 1080, z-score: 1174.5, E(): 0, (57.4% identity in 303 aa overlap) and SW:BCRA_BACLI bacitracin-resistance ABC transporter from Bacillus licheniformis (306 aa) fasta scores; opt: 567, z-score: 621.0, E(): 2.8e-27, (42.4% identity in 217 aa overlap). N-terminal region previously sequenced therefore identical to TR:P72389 (EMBL:U51332) partial, designated D7 (103 aa) fasta scores; opt [...] (317 aa)
SCO3161Putative ABC transport protein, ATP-binding subunit; Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity). (260 aa)
SCO3147SCE66.26c, possible ABC transporter ATP-binding subunit, len: 604aa; similar to many others eg. TR:O06476 (EMBL:D86418) from Bacillus subtilis (629 aa) fasta scores; opt: 1223, z-score: 1292.7, E(): 0, 37.0% identity in 638 aa overlap. Contains two Pfam matches to entry PF00005 ABC_tran, ABC transporter, three Prosite matches to PS00017 ATP/GTP-binding site motif A (P-loop) and two Prosite matches to PS00211 ABC transporters family signature. Also contains possible coiled-coil region 544-604aa. (604 aa)
SCO3111SCE41.20c, possible ABC transport system ATP-binding protein, len: 262 aa; similar to TR: CAB89461(EMBL:AL354048) Streptomyces coelicolor putative ABC transporter ATP-binding protein SCE25.31, 256 aa; fasta scores: opt: 1240 z-score: 1356.4 E(): 0; 75.2% identity in 246 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. (262 aa)
SCO3089SCE25.30 probable ABC transporter ATP-binding protein, len: 256 aa; similar to TR:CAB81857 (EMBL:AL16169) Streptomyces coelicolor putative ABC transporter ATP-binding protein SCD40A.12c, 246 aa; fasta scores: opt: 922 z-score: 1039.0 E(): 0; 58.4% identity in 238 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. (256 aa)
SCO2996SCE99.03, possible ABC transporter ATP-binding protein, len: 288 aa; similar to SW:RFB1_KLEPN (EMBL:L31775) Klebsiella pneumoniae O-antigen export system ATP-binding protein RfbB, 246 aa; fasta scores: opt: 550 z-score: 504.2 E(): 1.5e-20; 40.2% identity in 209 aa overlap and to TR:Q9X7V3 (EMBL:AL049085) Streptomyces coelicolor putative ABC transporter ATP-binding component SC6A5.07, 253 aa; fasta scores: opt: 1381 z-score: 963.7 E(): 0; 82.5% identity in 251 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and match to Prosite entry PS00017 ATP/GTP-binding si [...] (288 aa)
SCO2969Cell division ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division. (229 aa)
SCO2931SCE19A.31, probable ABC transporter ATP-binding protein, len: 424 aa; similar to many, including components of transporters involved in osmoregulation e.g. SW:PROV_BACSU (EMBL:U38418), proV, Bacillus subtilis glycine betaine/L-proline transport ATP-binding protein (404 aa), fasta scores; opt: 997 z-score: 1092.8 E(): 0, 45.7% identity in 359 aa overlap. Similar to SC9B1.09 (EMBL:AL049727) S.coelicolor ABC transporter ATP-binding subunit (386 aa) (49.0% identity in 365 aa overlap). Contains an approx. 20 aa N-terminal extension absent similar proteins. May be part of a multicomponent tr [...] (424 aa)
SCO2894SCE6.31c, possible ABC-transport protein, ATP-binding component, len: 354 aa. Similar to many other proposed transport proteins e.g. Synechocystis sp. (strain PCC 6803) TR:P73329(EMBL:D90905) ABC transporter (326 aa), fasta scores opt: 831 z-score: 906.9 E(): 0 45.3% identity in 296 aa overlap. Contains a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop) and a Pfam match to entry PF00005 ABC_tran, ABC transporter. (354 aa)
SCO2831SCE20.05, probable amino acid ABC transporter protein, ATP-binding component, len: 261 aa. Highly similar to many ATP-binding transport protein including: Bacillus stearothermophilus SW:GLNQ_BACST(EMBL:M61017) glutamine transport ATP-binding protein GLNQ (242 aa), fasta scores opt: 758 z-score: 851.7 E():0 47.5% identity in 242 aa overlap and Thermotoga maritima TR:Q9WZ60(EMBL:AE001734) amino acid ABC transporter, ATP-binding protein (242 aa), fasta scores opt: 829 z-score: 930.4 E(): 0 54.5% identity in 242 aa overlap. Also similar to several other Streptomyces coelicolor transport pr [...] (261 aa)
SCO2763SCC57A.34c, ABC transporter protein, ATP-binding component, len: 1253 aa. Highly similar to many Prokaryotic and Eukaryotic transport proteins including: Mycobacterium tuberculosis TR:O53645(EMBL:AL021928) putative ABC transporter (1194 aa), fasta scores opt: 2002 z-score: 2049.7 E():0 53.0% identity in 1231 aa overlap and Drosophila melanogaster SW:MDR4_DROME(EMBL:M59076) multidrug resistance protein homolog 50 (P-glycoprotein 50) (1302 aa), fasta scores opt: 1550 z-score: 1585.8 E():0 30.7% identity in 1267 aa overlap. Contains Prosite hits to 2x PS00017 ATP/GTP-binding site motif A [...] (1243 aa)
SCO2746ABC transporter protein, ATP binding component; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (517 aa)
SCO2723SCC46.08c, probable ABC transporter ATP-binding protein, len: 866 aa; C-terminal region similar to SW:YHCH_BACSU (EMBL:X96983) Bacillus subtilis hypothetical ABC transporter ATP-binding protein 2 in GlpD-CspB intergenic region, YhcH, 305 aa; fasta scores: opt: 597 z-score: 577.6 E(): 9.3e-25; 36.6% identity in 303 aa overlap and to SW:BCRA_BACLI (EMBL:L20573) Bacillus licheniformis bacitracin transport ATP-binding protein BcrA, 306 aa; fasta scores: opt: 581 z-score: 562.3 E(): 6.6e-24; 38.8% identity in 304 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and [...] (866 aa)
SCO2677SC6D10.20c, probable ABC transpoter ATP-binding protein, len: 547 aa; similar to various ABC transpoter ATP-binding proteins, e.g. TR:O53204 (EMBL:AL021246) Mycobacterium tuberculosis ABC-transpoter ATP binding protein MTV008.33c, 558 aa; fasta scores: opt: 2937 z-score: 3148.6 E(): 0; 79.5% identity in 551 aa overlap and to SW:UUP_ECOLI (EMBL:AE000197) Echerichia coli ABC transporter ATP-binding protein Uup, 635 aa; fasta scores: opt: 1134 z-score: 1216.4 E(): 0; 36.6% identity in 519 aa overlap. Contains two Pfam matches to entry PF00005 ABC_tran, ABC transporter, two matches to Pros [...] (547 aa)
SCO2674SC6D10.17, probable ABC transporter ATP-binding protein, len: 319 aa; similar to various ABC transporter, ATP-binding proteins, e.g. TR:O28803 (EMBL:AE001001) Archaeoglobus fulgidus ABC transporter ATP-binding protein AF1469, 226 aa; fasta scores: opt: 631 z-score: 717.1 E(): 1.6e-32; 45.7% identity in 219 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. (319 aa)
SCO2506SCC121.09, probable metal transport ABC transporter, len: 256 aa; similar to TR:Q9XDA6 (EMBL:AF104349) Listeria monocytogenes ABC transporter ZurA, 257aa; fasta scores: opt: 468 z-score: 522.7 E(): 1e-21; 38.0% identity in 237 aa overlap and to SW:FHUC_ECOLI (EMBLX05810:) Escherichia coli ferrichrome transport ATP-binding protein FhuC, 265 aa; fasta scores: opt: 416 z-score: 465.6 E(): 1.5e-18; 34.8% identity in 256 aa overlap. Contains Pfam match to entry PF00005 ABC_tran and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop). (256 aa)
SCO2464SC7A8.03, probable ABC transporter, len: 642 aa; similar to TR:Q9WYC4 (EMBL:AE001710) Thermotoga maritima ABC transporter, ATP-binding protein, 598 aa; fasta scores: opt: 1520 z-score: 1587.7 E(): 0; 40.3% identity in 613 aa overlap and to SW:YC72_MYCTU (EMBL:Z77137) Mycobacterium tuberculosis hypothetical ABC transporter ATP-binding protein RV1273c, 631 aa; fasta scores: opt: 2325 z-score: 2426.2 E(): 0; 57.6% identity in 632 aa overlap. Contains two Pfam matches to entry PF00664 ABC_membrane, ABC transporter transmembrane region and two matches to Prosite entries PS00017 ATP/GTP-bind [...] (642 aa)
SCO2463SC7A8.02, probable ABC transporter, len: 577 aa; similar to TR:Q9WYC3 (EMBL:AE001710) Thermotoga maritima ABC transporter, ATP-binding protein, 577 aa; fasta scores: opt: 1411 z-score: 1575.1 E(): 0; 39.9% identity in 569 aa overlap and to SW:YC73_MYCTU (EMBL:Z77137) Mycobacterium tuberculosis hypothetical ABC transporter ATP-binding protein RV1273c, 582 aa; fasta scores: opt: 1966 z-score: 2193.8 E(): 0; 51.7% identity in 574 aa overlap. Contains Pfam two matches to entry PF00664 ABC_membrane, ABC transporter transmembrane region and two matches to Prosite entries PS00017 ATP/GTP-bind [...] (577 aa)
SCO2422SCC42.03c, possible ABC-transporter ATP-binding protein, len: 343 aa; similar to SW:YRBF_HAEIN (EMBL:U32788) Haemophilus influenzae hypothetical ABC-transporter ATP-binding protein HI1087, 264 aa; fasta scores: opt: 680 z-score: 686.6 E(): 8.9e-31; 41.4% identity in 244 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. (343 aa)
SCO2405SC4A7.24, probable sugar-transport ATP binding protein, len: 513 aa; similar to TR:AAD45713 (EMBL:AF160811) Bacillus stearothermophilus L-arabinose transport, ATP binding protein AraG, 513 aa; fasta scores: opt: 2220 z-score: 2417.4 E(): 0; 65.5% identity in 510 aa overlap and to SW:ALSA_ECOLI (EMBL:U14003) Escherichia coli D-allose transport ATP-binding protein AlsA, 510 aa; fasta scores: opt: 1200 z-score: 1308.3 E(): 0; 40.7% identity in 514 aa overlap. Contains two Pfam matches to entry PF00005 ABC_tran, ABC transporter and two matches to Prosite entries PS00017 ATP/GTP-binding sit [...] (525 aa)
SCO2324Putative ABC transporter ATP-binding subunit; Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity). (563 aa)
SCO2305SCC30.13, probable ABC transporter ATP-binding subunit, len: 308 aa; similar to TR:AAF12291 (EMBL:AE001862) Deinococcus radiodurans ABC transporter, ATP-binding protein, putative, DRA0007, 301 aa; fasta scores: opt: 753 z-score: 842.3 E(): 0; 47.9% identity in 288 aa overlap and to SW:NODI_RHILO (EMBL:X55705) Rhizobium loti nodulation ATP-binding protein I, NodI, 339 aa; fasta scores: opt: 576 z-score: 645.7 E(): 1.6e-28; 37.3% identity in 303 aa overlap. Also similar to various Streptomyces coelicolor ABC transporter ATP-binding proteins, e.g. TR:CAB56355 (EMBL:AL118514) S. coelicolor [...] (308 aa)
SCO2274ABC transport protein, ATP-binding component; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system. (280 aa)
SCO2257SCC75A.03, probable ABC transporter, ATP-binding component, len: 365 aa. Highly similar to many ABC transport proteins e.g. Streptomyces peucetius SW:DRRA_STRPE(EMBL:M73758) daunorubicin resistance ATP-binding protein (330 aa), fasta scores opt: 922 z-score: 1009.0 E():0 48.9% identity in 329 aa overlap and Streptomyces antibioticus TR:Q53716(EMBL:L06249) ATP-binding protein OLEC-ORF4 involved in oleandomycin-resistance (325 aa), fasta scores opt: 1883 z-score: 2052.8 E():0 89.7% identity in 329 aa overlap. Also similar to several Streptomyces coelicolor putative ABC transporter ATP-bi [...] (365 aa)
SCO2061SC4G6.30c, possible ABC transport ATP-binding subunit, len: 324aa; similar to many eg. TR:Q53716 (EMBL:L06249) ATP-binding protein from Streptomyces antibioticus (325 aa) fasta scores; opt: 611, z-score: 658.7, E(): 2.3e-29, (39.4% identity in 310 aa overlap). Also similar to TR:CAB42771 (EMBL:AL049841) from Streptomyces coelicolor (315 aa) fasta scores; opt: 599, z-score: 646.2, E(): 1.1e-28, (40.9% identity in 291 aa overlap). Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and Prosite matches to PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding sit [...] (324 aa)
SCO2012SC7H2.26, probable branched chain amino acid transport ATP-binding protein, len: 238aa; similar to many eg. SW:LIVF_ECOLI branched chain amino acid transport ATP-binding protein from Escherichia coli (237 aa) fasta scores; opt: 774, z-score: 860.8, E(): 0, (52.4% identity in 233 aa overlap). Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and Prosite matches to PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. (238 aa)
SCO2011SC7H2.25, probable branched chain amino acid transport ATP-binding protein, len: 309aa; similar to many eg. SW:LIVG_ECOLI branched chain amino acid transport ATP-binding protein from Escherichia coli (255 aa) fasta scores; opt: 770, z-score: 837.9, E(): 0, (46.8% identity in 250 aa overlap). Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop). (309 aa)
SCO1958ABC excision nuclease subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (1014 aa)
SCO1928SCC22.10, possible ABC transporter, ATP-binding subunit, len: 307aa; similar to many egs. SW:DRRA_STRPE daunorubicin resistance ATP-binding protein from Streptomyces peucetius (330 aa) fasta scores; opt: 571, z-score: 637.1, E(): 3.7e-28, (35.6% identity in 315 aa overlap) and TR:O53149 (EMBL:AL021184) putative ABC transporter, ATP-binding protein from Mycobacterium tuberculosis (313 aa) fasta scores; opt: 1170, z-score: 1297.6, E(): 0, (60.9% identity in 304 aa overlap). Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and Prosite matches to PS00017 ATP/GTP-binding site [...] (307 aa)
SCO1922SCC22.04c, possible ABC transporter ATP-binding subunit, len: 254aa; similar to many proposed ABC transporter subunit eg. SW:ABCX_CYAPA probable ATP-dependent transporter from Cyanophora paradoxa (259 aa) fasta scores; opt: 856, z-score: 945.3, E(): 0, (55.3% identity in 246 aa overlap). Also highly similar to TR:O53154 (EMBL:AL021184) hypothetical protein from Mycobacterium tuberculosis (266 aa) fasta scores; opt: 1258, z-score: 1383.7, E(): 0, (76.9% identity in 251 aa overlap). Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and Prosite match to PS00017 ATP/GTP-bindin [...] (254 aa)
SCO1840SCI8.25c, probable ABC transporter, ATP binding subunit, len: 532 aa. Highly similar to many e.g. Mycobacterium tuberculosis TR:O53164 (EMBL: AL021184) ABC transporter ATP binding protein (542 aa), fasta scores opt: 2213 z-score: 2308.8 E():0 63.5% identity in 542 aa overlap and Escherichia coli SW: YBIT_ECOLI (EMBL: AE000184) ABC transporter ATP-binding protein (530 aa), fasta scores opt: 921 z-score: 963.6 E():0 33.5% identity in 534 aa overlap. Contains 2xPfam match to entry PF00005 ABC_tran ABC transporter. In addition to Prosite hits to 2xPS00017 ATP/GTP-binding site motif A (P-lo [...] (532 aa)
SCO1806Putative ABC transporter ATP-binding protein; SCI33.05c, conserved hypothetical protein, len: 876 aa; similar to TR:O65934 (EMBL:Z95890) Mycobacterium tuberculosis hypothetical 92.2 kDa protein MTCY28.10, 865 aa; fasta scores: opt: 1196 z-score: 907.2 E(): 0; 37.8% identity in 883 aa overlap and to TR:AAK46062 (EMBL:AE007039) Mycobacterium tuberculosis ABC transporter, ATP-binding protein MT1789, 863 aa; fasta scores: opt: 1196 Z-score: 892.8 E(): 4.3e-42; 37.826% identity in 883 aa overlap. Contains 2x Pfam matches to entry PF00498 FHA, FHA domain (N-terminal region) and Pfam match to [...] (876 aa)
SCO1798SCI5.06c, possible ABC transporter ATP-binding subunit, len: 265aa; similar to many egs. TR:O53288 (EMBL:AL021287) predicted ABC transporter ATP-binding subunit (287 aa) fasta scores; opt: 893, z-score: 998.3, E(): 0, (53.3% identity in 257 aa overlap) and SW:LIVG_SALTY high-affinity branched-chain amino acid transporter from Salmonella typhimurium (255 aa) fasta scores; opt: 343, z-score: 390.2, E(): 2.1e-14, (31.0% identity in 248 aa overlap). Contains Pfam match to PF00005 ABC transporter transmembrane region and Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop). (265 aa)
SCO1785SCI51.25c, probable iron-siderophore uptake system ATP-binding component, len: 301 aa; similar to many ATP-binding components from binding-protein-dependent iron uptake systems using a range of siderophores e.g. SW:FEPC_ECOLI (EMBL:X57471), fepC, Escherichia coli ferric enterobactin transport ATP-binding protein (271 aa), fasta scores; opt: 1101 z-score: 1184.4 E(): 0, 61.5% identity in 260 aa overlap. Similar to other binding-protein-dependent permease subunits e.g. SC9B1.09 (EMBL:AL049727) S.coelicolor putative ABC transporter ATP-binding subunit (386 aa) (37.7% identity in 228 aa ov [...] (301 aa)
SCO1742SCI11.31, probable ABC-transporter ATP-binding protein, len: 319 aa; similar to SW:BCRA_BACLI (EMBL:L20573), bcrA, Bacillus licheniformis bacitracin transport ATP-binding protein (306 aa), fasta scores; opt: 561 z-score: 595.7 E(): 7.5e-26, 36.2% identity in 298 aa overlap and to many putative ABC-transporter ATP-binding proteins. Similar to others from S.coelicolor e.g. SCE8.17C (EMBL:AL035654) S.coelicolor probable ABC transporter ATP-binding protein (317 aa) (45.9% identity in 296 aa overlap). Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and PS00017 ATP/GTP-binding [...] (306 aa)
SCO1719SCI11.08, possible ABC-transporter ATP-binding protein, len: 332 aa; similar to members of the ABC-transporter superfamily e.g. SW:DRRA_STRPE (EMBL:M73758), drrA, Streptomyces peucetius daunorubicin resistance ATP-binding protein (330 aa), fasta scores; opt: 901 z-score: 964.0 E(): 0, 50.6% identity in 316 aa overlap. Similar to many from S.coelicolor e.g. SCE9.25c (EMBL:AL049841) S.coelicolor probable ABC transporter ATP-binding component (315 aa) (57.1% identity in 308 aa overlap). Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and PS00017 ATP/GTP-binding site motif A [...] (332 aa)
SCO1707SCI30A.28c, probable ABC sugar transporter, ATP-binding subunit, len: 445aa; similar to many eg. TR:AAD24578 (EMBL:AF126010) trehalose/maltose transport ATP-hydrolysing subunit from hyperthermophilic archaeon Thermococcus litoralis (372 aa) fasta scores; opt: 975, z-score: 1068.2, E(): 0, (50.1% identity in 335 aa overlap). Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and Prosite matches to PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop). (445 aa)
SCO1621SCI41.04c, opuAA glycine betaine transport ATP-binding protein, len: 364 aa. Highly similar to SW:OPUA_BACSU (P46920) Bacillus subtilis glycine betaine transport ATP-binding protein; fasta scores: opt: 1093 z-score: 1200.6 E():0; 52.4% identity in 328 aa overlap. Contains Pfam match to PF00005 ABC_tran, ABC transporter and PS00211 ABC transporters family signature. (364 aa)
SCO1559Putative ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (368 aa)
SCO1367SC10A9.09c, probable ABC transport system ATP-binding protein, len: 251 aa; similar to SW:LOLD_ECOLI (EMBL:AE000212) Escherichia coli lipoprotein releasing system ATP-binding protein LolD, 233 aa; fasta scores: opt: 530 z-score: 576.0 E(): 1.2e-24; 40.8% identity in 218 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. (251 aa)
SCO12582SCG18.05c, possible ABC transport system ATP-binding protein, len: 306 aa; similar to TR:CAB94566 (EMBL:AL359152) Streptomyces coelicolor putative ABC transporter ATP-binding protein 2SC6G5.39c, 346 aa; fasta scores: opt: 1018 z-score: 1166.6 E(): 0; 53.9% identity in 306 aa overlap and to SW:BCRA_BACLI (EMBL:L20573) Bacillus licheniformis bacitracin transport ATP-binding protein BcrA, 306 aa; fasta scores: opt: 594 z-score: 684.6 E(): 1.2e-30; 35.6% identity in 303 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and matches to Prosite entries PS00017 ATP/GT [...] (306 aa)
SCO1148SCG8A.02, probable ABC transporter, len: 593aa; similar to many eg. TR:CAB76002 (EMBL:AL157916) putative ABC transporter from Streptomyces coelicolor (583 aa) fasta scores; opt: 1624, z-score: 1736.4, E(): 0, 46.8% identity in 575 aa overlap. Contains Pfam match to entry PF00664 ABC_membrane, ABC transporter transmembrane region, Pfam match to entry PF00005 ABC_tran, ABC transporter and Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop). Also contains possible membrane-spanning hydrophobic regions. (593 aa)
SCO11472SCG38.40, probable ABC transporter transmembrane protein (fragment), len: >35 aa; SCG8A.01, partial CDS, probable ABC transporter transmembrane subunit, len: >623aa; similar to many eg. TR:O87312 (EMBL:AF027770) FxtA iron sequestration protein from Mycobacterium smegmatis (574 aa) fasta scores; opt: 794, z-score: 866.3, E(): 0, 35.2% identity in 514 aa overlap. Contains Pfam match to entry PF00664 ABC_membrane, ABC transporter transmembrane region, Pfam match to entry PF00005 ABC_tran, ABC transporter and Prosite match to PS00211 ABC transporters family signature. Also contains possib [...] (625 aa)
SCO11442SCG38.37c, possible ABC transporter ATP-binding protein, len: 600 aa; similar to TR:P71082 (EMBL:Z82044) Bacillus subtilis unidentified transporter-ATP binding YgaD, 589 aa; fasta scores: opt: 1229 z-score: 1240.6 E(): 0; 34.2% identity in 576 aa overlap. Contains Pfam matches to entries PF00664 ABC_membrane, ABC transporter transmembrane region and PF00005 ABC_tran, ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. Also contains possible hydrophobic membrane spanning regions. (600 aa)
SCO1032SCG20A.12c, probable ABC transport system ATP-binding protein, len: 249 aa; similar to many, e.g. TR:CAB89461 (EMBL:AL354048) Streptomyces coelicolor putative ABC transport system ATP-binding protein SCE25.31, 256 aa; fasta scores: opt: 1112 z-score: 953.1 E(): 0; 67.9% identity in 240 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and match to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. (249 aa)
SCO09982SCG2.11, ftrE, Fe uptake system permease, len: 272 aa; similar to previously sequenced and annotated as TR:Q9X470 (EMBL:AF099015) Streptomyces coelicolor Fe uptake system permease FtrE, 271 aa; fasta scores:opt: 1424 z-score: 1545.2 E(): 0; 89.5% identity in 257 aa overlap and similar to TR:CAB94640 (EMBL:AL359215) Streptomyces coelicolor putative iron transport protein, ATP-binding component SC2H12.16, 258 aa; fasta scores: opt: 834 z-score: 672.9 E(): 7.8e-32; 55.4% identity in 251 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and matches to Prosite entr [...] (272 aa)
SCO0918SCM10.06, probable excinuclease ABC subunit A, len: 781 aa; similar to SW:UVRA_PSELE (EMBL:Z22595) Pseudomonas lemoignei putative excinuclease ABC subunit A (fragment) UvrA, 689 aa; fasta scores: opt: 1263 z-score: 1326.5 E(): 0; 57.5% identity in 670 aa overlap, to SW:UVRA_MICLU (EMBL:X15867) Micrococcus luteus excinuclease ABC subunit A UvrA, 992 aa; fasta scores: opt: 1096 z-score: 1149.1 E(): 0; 40.9% identity in 962 aa overlap and to S. coelicolor SC5F2A.02c, 752 aa; fasta scores: opt: 1207 z-score: 981.3 E(): 0; 44.8% identity in 772 aa overlap. Contains two Pfam matches to entry [...] (781 aa)
SCO0824SCF43A.14, probable ABC transporter ATP-binding protein, len: 296 aa; similar to many e.g. SW:NOSF_PSEST (EMBL:X53676), nosF, Pseudomonas stutzeri copper transport ATP-binding protein (308 aa), fasta scores; opt: 375 z-score: 445.1 E(): 1.8e-17, 36.8% identity in 223 aa overlap (divergent at the C-terminus). Similar to many from S.coelicolor e.g. SCE7.06c (EMBL:AL049819) probable ABC transporter ATP-binding subunit (276 aa) (40.7% identity in 231 aa overlap). Contains Pfam match to entry PF00005 ABC_tran, ABC transporter and PS00017 ATP/GTP-binding site motif A (P-loop). (296 aa)
SCO0811Putative ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (505 aa)
SCO0756SCF81.15, possible ABC transporter, len: 940 aa; similar to TR:P74829 (EMBL:U51197) Sphingomonas sp. S88 hypothetical 79.4 KD protein AtrB, 728 aa; fasta scores: opt: 803 z-score: 870.4 E(): 0; 32.7% identity in 562 aa overlap and to SW:CYAB_BORPE (EMBL:X14199) Bordetella pertussis cyclolysin secretion ATP-binding protein CyaB, 712 aa; fasta scores: opt: 785 z-score: 851.0 E(): 0; 32.2% identity in 631 aa overlap. Contains two matches to Pfam entries PF00664 ABC_membrane, ABC transporter transmembrane region and PF00005 ABC_tran, ABC transporter and two to Prosite entries PS00017 ATP/G [...] (940 aa)
SCO0755SCF81.14, possible ABC transporter, len: 740 aa; similar to SW: COMA_STRPN (EMBL:M36180) Streptococcus pneumoniae transport ATP-binding protein ComA, 717 aa; fasta scores: opt: 1035 z-score: 1141.5 E(): 0; 29.1% identity in 721 aa overlap. Contains two matches to Pfam entries PF00664 ABC_membrane, ABC transporter transmembrane region and PF00005 ABC_tran, ABC transporter and two to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transporters family signature. (740 aa)
SCO0742SCF81.01, ABC transporter (partial CDS), len: >38 aa; identical to C-terminal region of previously sequenced TR:Q9ZNB0 (EMBL:AB019513) Streptomyces coelicolor ABC transporter, 584 aa; 3SC5B7.20, ABC transporter ATP-binding protein (fragment), len: >578 aa; identical to previously sequenced TR:Q9ZNB0 (EMBL:AB019513) Streptomyces coelicolor ABC transporter, 584 aa. Contains Pfam match to entry PF00664 ABC_membrane, ABC transporter transmembrane region and PF00005 ABC_tran, ABC transporter and matches to Prosite entries PS00017 ATP/GTP-binding site motif A (P-loop) and PS00211 ABC transpo [...] (584 aa)
SCO0710SCF42.20c, possible branched-chain amino acid transport ATP-binding protein, len: 263 aa. Similar to many including: Pseudomonas aeruginosa SW:BRAG_PSEAE(EMBL:D90223) high-affinity branched-chain amino acid transport ATP-binding protein, BraG (233 aa), fasta scores opt: 642 z-score: 685.0 E(): 9.1e-31 46.7% identity in 240 aa overlap and Streptomyces coelicolor TR:CAB52068(EMBL:AL109732) putative branched chain amino acid transport ATP-binding protein, SC7H2.26 (238 aa), fasta scores opt: 724 z-score: 770.7 E():0 48.5% identity in 241 aa overlap. Also similar to the adjoining CDS on th [...] (263 aa)
SCO0709SCF42.19c, possible branched-chain amino acid transport ATP-binding protein, len: 266 aa. Similar to many including: Pseudomonas aeruginosa SW:BRAF_PSEAE(EMBL:D90223) high-affinity branched-chain amino acid transport ATP-binding protein, BraF (255 aa), fasta scores opt: 689 z-score: 786.7 E():0 41.3% identity in 252 aa overlap and Deinococcus radiodurans TR:AAF11669(EMBL:AE002047) branched-chain amino acid ABC transporter, ATP-binding protein (259 aa), fasta scores opt: 749 z-score: 854.2 E():0 46.9% identity in 256 aa overlap. Also similar to Streptomyces coelicolor TR:CAB52067(EMBL:A [...] (266 aa)
SCO0700SCF42.10c, probable ABC transporter protein, ATP-binding component, len: 589 aa. The N-terminus is identical to the previously sequenced Streptomyces coelicolor TR:Q53899(EMBL:X60316) pleiotropic regulatory locus AbaA, OrfC (fragment)(>131 aa), fasta scores opt: 856 z-score: 951.7 E(): 0 100.0% identity in 131 aa overlap. Also highly similar to many including: Escherichia coli SW:MSBA_ECOLI(EMBL:Z11796) probable transport ATP-binding protein, MsbA (582 aa), fasta scores opt: 875 z-score: 963.0 E():0 31.4% identity in 566 aa overlap and Deinococcus radiodurans TR:AAF12435(EMBL:AE001863) [...] (589 aa)
SCO0636SCF56.20, probable ABC transporter ATP-binding protein, len: 544 aa; similar to TR:Q9X7M6 (EMBL:AL049587) Streptomyces coelicolor putative ABC transporter SC5F2A.03c, 544 aa; fasta scores: opt: 1673 z-score: 1706.2 E(): 0; 52.2% identity in 542 aa overlap and to SW:MSRA_STAEP (EMBL:X52085) Staphylococcus epidermidis erythromycin resistance ATP-binding protein MsrA, 488 aa; fasta scores: opt: 351 z-score: 362.8 E(): 7.9e-13; 28.6% identity in 514 aa overlap. Contains two Pfam matches to entry PF00005 ABC_tran, ABC transporter and two matches to Prosite entry PS00017 ATP/GTP-binding site [...] (544 aa)
SCO0495SCF34.14c, probable iron-siderophore ABC-transporter ATP-binding protein, len: 287 aa; similar to SW:FEPC_ECOLI (EMBL:X57471), FepC, Escherichia coli ferric enterobactin transport ATP-binding protein (271 aa), fasta scores; opt: 946 z-score: 1003.1 E(): 0, 52.3% identity in 262 aa overlap and to many other iron-siderophore ATP-binding proteins. Similar to many others from S. coelicolor e.g. SCI51.25c (EMBL:AL109848) S.coelicolor probable iron-siderophore uptake system ATP-binding component (301 aa) (58.9% identity in 258 aa overlap). Contains Pfam match to entry PF00005 ABC_tran, ABC t [...] (287 aa)
SCO0493SCF34.12c, probable ABC-transporter transmembrane protein, len: 601 aa; similar to the C-terminal half of TR:O85018 (EMBL:AF034152), ExiT, Mycobacterium smegmatis ABC-transporter associated with ferric exochelin biosynthetic and uptake (possibly involved in exochelin secretion) (1122 aa), fasta scores; opt: 1778 z-score: 1789.6 E(): 0, 50.4% identity in 585 aa overlap, to TR:Q54204 (EMBL:X89010), StrW, Streptomyces glaucescens putative ABC-transporter from the hydroxystreptomycin production locus (591 aa) (33.1% identity in 577 aa overlap) and to many other ABC-transporters. Similar to [...] (601 aa)
SCO0491SCF34.10c, probable ABC-transporter transmembrane protein, len: 540 aa; similar to transporters e.g. SW:PRTD_ERWCH (EMBL:M60395), PrtD, Erwinia chrysanthemi proteases secretion ATP-binding protein (575 aa), fasta scores; opt: 433 z-score: 468.5 E(): 9.7e-19, 29.1% identity in 413 aa overlap. Similar to TR:O87312 (EMBL:AF027770), FxtA, Mycobacterium smegmatis hypothetical protein at exochelin locus (574 aa) (39.7% identity in 524 aa overlap). Similar to others from S.coelicolor e.g. to the N-terminal half of TR:Q9ZBY5 (EMBL:AL034355), CydCD, Streptomyces coelicolor probable ABC transpor [...] (540 aa)
SCO0476SCF76.16, ABC transport protein, ATP-binding subunit, len: 252 aa. Similar to many e.g. Haemophilus influenzae SW:FECE_HAEIN (EMBL; U32720) iron(III) dicitrate transport ATP-binding protein FecE homolog (306 aa), fasta scores opt: 375 z-score: 413.4 E(): 1.2e-15 37.3% identity in 185 aa overlap. Contains a Prosite hit to PS00211 ABC transporters family signature and PS00017 ATP/GTP-binding site motif A (P-loop). (252 aa)
SCO0374SCF41.33, putative ABC transport protein, len: 589 aa. Similar to many e.g. Streptomyces coelicolor TR:Q9ZNB0 (EMBL; AB019513) ABC transporter (584 aa), fasta scores opt: 597 z-score: 649.7 E(): 7.7e-29 30.9% identity in 572 aa overlap. Contains a Pfam match to entry PF00005 ABC_tran, ABC transporter and a PS00017 ATP/GTP-binding site motif A (P-loop). Contains membrane-spanning hydrophobic domains. (589 aa)
SCO0322SCF12.01c, possible ABC transport ATP-binding subunit, len: >230aa; similar to many eg. SW:TLRC_STRFR tylosin resistance ATP-binding protein from Streptomyces fradiae (548 aa) fasta scores; opt: 1017, z-score: 1131.8, E(): 0, (69.0% identity in 232 aa overlap). Contains Prosite match to PS00211 ABC transporters family signature and Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop); SC5G9.31c, probable ABC-transporter ATP-binding protein, partial CDS, len: >371 aa; similar ATP-binding components from antibiotic resistance export systems e.g. SW:TLRC_STRFR (EMBL:M57437), tlr [...] (564 aa)
SCO0121SCJ21.02c, probable ABC transport system ATP-binding protein, len: 204 aa; similar to many e.g. NUC_ECOLI high-affinity zinc uptake system ATP-binding protein (251 aa), fasta scores; opt: 327 z-score: 404.3 E(): 3.6e-15, 35.2% identity in 179 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop) and Pfam match to entry PF00005 ABC_tran, ABC transporter. (204 aa)
Your Current Organism:
Streptomyces coelicolor
NCBI taxonomy Id: 100226
Other names: S. coelicolor A3(2), Streptomyces coelicolor A3(2)
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