Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SCO3964 | SCO4053 | gene:17761591 | gene:17761684 | Hypothetical protein SCD78.31c; SCBAC25E3.01c, possible integral membrane protein, len: >433aa: similar to TR:Q9AK64 (EMBL:AL583944) putative transport integral membrane protein 2SCD60.19 from Streptomyces coelicolor (589 aa) fasta scores; opt: 852, Z-score: 887.7, 51.646% identity (53.968% ungapped) in 395 aa overlap. Contains multiple possible membrane-spanning hydrophobic regions; SCD78.31c, unknown, partial CDS len: >180 aa; contains two hydrophobic domains, 6 degenerate repeats of (G /T)KAS and 4 degenerate repeats of TAKGSG; putative integral membrane protein. | 2SCD60.19, possible transport integral membrane protein, len: 589 aa; similar to TR:P94432 (EMBL:D50453) Bacillus subtilis homologue of copper export protein YcnJ, 541 aa; fasta scores: opt: 394 z-score: 369.0 E(): 5.4e-13; 27.8% identity in 442 aa overlap. Contains possible hydrophobic membrane spanning regions. | 0.596 |
| SCO4053 | SCO3964 | gene:17761684 | gene:17761591 | 2SCD60.19, possible transport integral membrane protein, len: 589 aa; similar to TR:P94432 (EMBL:D50453) Bacillus subtilis homologue of copper export protein YcnJ, 541 aa; fasta scores: opt: 394 z-score: 369.0 E(): 5.4e-13; 27.8% identity in 442 aa overlap. Contains possible hydrophobic membrane spanning regions. | Hypothetical protein SCD78.31c; SCBAC25E3.01c, possible integral membrane protein, len: >433aa: similar to TR:Q9AK64 (EMBL:AL583944) putative transport integral membrane protein 2SCD60.19 from Streptomyces coelicolor (589 aa) fasta scores; opt: 852, Z-score: 887.7, 51.646% identity (53.968% ungapped) in 395 aa overlap. Contains multiple possible membrane-spanning hydrophobic regions; SCD78.31c, unknown, partial CDS len: >180 aa; contains two hydrophobic domains, 6 degenerate repeats of (G /T)KAS and 4 degenerate repeats of TAKGSG; putative integral membrane protein. | 0.596 |