STRINGSTRING
SCO5011 SCO5011 SCO5010 SCO5010
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SCO5011SCK15.13, possible integral membrane protein, len: 300 aa; similar to TR:O27061 (EMBL:AE000871) Methanobacterium thermoautotrophicum conserved protein MTH980, 313 aa; fasta scores: opt: 235 z-score: 285.2 E(): 2e-08; 27.7% identity in 238 aa overlap. Contains possible N-terminal region signal peptide sequence and possible hydrophobic membrane spanning regions. (300 aa)
SCO5010SCK15.12, possible integral membrane protein, len: 316 aa; similar to TR:AAF40196 (EMBL:AF229646) Caulobacter crescentus hypothetical 34.6 kD protein, 325 aa; fasta scores: opt: 287 z-score: 328.2 E(): 8.2e-11; 21.9% identity in 315 aa overlap. Contains possible N-terminal region signal peptide sequence and possible hydrophobic membrane spanning regions. (316 aa)
Your Current Organism:
Streptomyces coelicolor
NCBI taxonomy Id: 100226
Other names: S. coelicolor A3(2), Streptomyces coelicolor A3(2)
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