(6 nodes) N-terminal TM domain of oligopeptide transport permease C network (Streptomyces coelicolor)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	SCO5714	SC9F2.02, possible peptide transport permease, len: 317aa; similar to many (confirmed and proposed) eg. SW:APPC_BACSU oligopeptide transport permease, AppC, from Bacillus subtilis (303 aa) fasta scores; opt: 638, z-score: 718.2, E(): 1.1e-32, (36.5% identity in 277 aa overlap). Contains probable membrane spanning hydrophobic regions. Also contains Pfam match to entry PF00528 BPD_transp, Binding-protein-dependent transport systems inner membrane component, score 42.30, E-value 1.1e-08. (317 aa)
	SCO5112	SCBAC31E11.08, bldKA, possible ABC transport system integral membrane protein, len: 343 aa; identical to previously sequenced TR:P72406 (EMBL:U68036) Streptomyces coelicolor BldKA, 335 aa. Methionine start codon 9 amino acids upstream from the previous sequence start; possible frameshift from frame 2 into frame 1 in the previously sequenced DNA. Contains Pfam match to entry PF00528 BPD_transp, Binding-protein-dependent transport systems inner membrane component and match to Prosite entry PS00402 Binding-protein-dependent transport systems inner membrane comp sign. Also contains possibl [...] (343 aa)
	SCO5119	SC9E12.04, probable peptide transport system integral membrane protein, len: 305 aa; similar to SW:OPPC_BACSU (EMBL:X56347) Bacillus subtilis oligopeptide transport system permease protein OppC, 305 aa; fasta scores: opt: 670 z-score: 745.0 E(): 0; 35.5% identity in 296 aa overlap and to TR:P72406 (EMBL:U68036) Streptomyces coelicolor SpoOKB homologue BldKA, 335 aa; blastp scores: Score = 382 (134.5 bits), Expect = 9.1e-41, Sum P(2) = 9.1e-41; Identities = 88/231 (38%), Positives = 134/231 (58%). Contains Pfam match to entry PF00528 BPD_transp, Binding-protein-dependent transport syste [...] (305 aa)
	SCO5476	SC2A11.10, probable oligopeptide transport integral membrane protein, len: 335 aa; similar to mnay e.g. APPC_BACSU oligopeptide transport permease protein appC (303 aa), fasta scores; opt: 465 z-score: 1038.5 E(): 0, 41.4% identity in 309 aa overlap. Also similar to S. coelicolor TR:P72406 (EMBL:U68036) bldKA (335 aa), fasta scores; opt: 912 z-score: 1192.3 E(): 0, 42.1% identity in 330 aa overlap. Contains PS00402 Binding-protein-dependent transport systems inner membrane comp signature and Pfam match to entry PF00528 BPD_transp, Binding-protein-dependent transport systems inner membr [...] (335 aa)
	SCO6112	SCBAC1A6.36c, probable oligopeptide ABC transporter integral membrane protein, len: 297 aa; similar to SW:APPC_BACSU (EMBL:U20909) Bacillus subtilis oligopeptide transport system permease protein AppC, 303 aa; fasta scores: opt: 725 z-score: 842.9 E(): 0; 39.4% identity in 287 aa overlap. Contains Pfam match to entry PF00528 BPD_transp, Binding-protein-dependent transport systems inner membrane component. Also contains possible hydrophobic membrane spanning regions. (297 aa)
	SCO7565	SC5F1.19, probable oligopeptide ABC transporter integral membrane protein, len: 301 aa; similar to SW:DPPC_ECOLI (EMBL:L08399) Escherichia coli dipeptide transport system permease protein DppC, 300 aa; fasta scores: opt: 805 z-score: 912.6 E(): 0; 45.2% identity in 270 aa overlap. Contains Pfam match to entry PF00528 BPD_transp, Binding-protein-dependent transport systems inner membrane component and match to Prosite entry PS00038 Myc-type, 'helix-loop-helix' dimerization domain signature. Also contains possible hydrophobic membrane spanning regions. (301 aa)