STRINGSTRING
pdhA pdhA ipk ipk SSIL_0064 SSIL_0064 SSIL_0552 SSIL_0552 murQ murQ SSIL_0808 SSIL_0808 mutS2 mutS2 SSIL_1292 SSIL_1292 selO selO hemA hemA SSIL_1398 SSIL_1398 SSIL_1408 SSIL_1408 nadD nadD miaA miaA SSIL_1554 SSIL_1554 SSIL_1715 SSIL_1715 SSIL_2018 SSIL_2018 SSIL_2074 SSIL_2074 SSIL_2313 SSIL_2313 SSIL_2807 SSIL_2807 nfo nfo ribC ribC SSIL_3196 SSIL_3196 SSIL_3426 SSIL_3426 SSIL_3492 SSIL_3492 SSIL_3511 SSIL_3511 SSIL_3686 SSIL_3686 SSIL_3687 SSIL_3687 SSIL_3808 SSIL_3808
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pdhAPyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). (371 aa)
ipk4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (288 aa)
SSIL_0064FAD synthase. (270 aa)
SSIL_0552N-Dimethylarginine dimethylaminohydrolase. (284 aa)
murQPredicted sugar phosphate isomerase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. (301 aa)
SSIL_0808Site-specific DNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (392 aa)
mutS2Mismatch repair ATPase; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. (788 aa)
SSIL_1292Uncharacterized conserved protein. (242 aa)
selOUncharacterized conserved protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family. (487 aa)
hemAglutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (451 aa)
SSIL_1398benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB. (131 aa)
SSIL_1408Site-specific DNA methylase. (286 aa)
nadDNicotinic acid mononucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (197 aa)
miaAtRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (302 aa)
SSIL_1554Uncharacterized protein. (181 aa)
SSIL_1715Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component, eukaryotic type, alpha subunit. (337 aa)
SSIL_2018Protein containing SET domain. (127 aa)
SSIL_2074Transcriptional regulator. (200 aa)
SSIL_2313Predicted ATPase of PP-loop superfamily. (229 aa)
SSIL_2807Uncharacterized conserved protein. (192 aa)
nfoEndonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. (295 aa)
ribCFAD synthase; Belongs to the ribF family. (316 aa)
SSIL_3196Uncharacterized conserved protein. (254 aa)
SSIL_3426HD superfamily phosphohydrolase. (435 aa)
SSIL_3492Protein containing SET domain. (192 aa)
SSIL_3511Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase. (505 aa)
SSIL_3686PEP phosphonomutase. (287 aa)
SSIL_3687FAD synthase. (261 aa)
SSIL_3808Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase. (391 aa)
Your Current Organism:
Solibacillus silvestris
NCBI taxonomy Id: 1002809
Other names: S. silvestris StLB046, Solibacillus silvestris StLB046, Solibacillus silvestris str. StLB046, Solibacillus silvestris strain StLB046
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