STRINGSTRING
SSIL_0131 SSIL_0131 SSIL_0285 SSIL_0285 SSIL_0383 SSIL_0383 ycbL ycbL SSIL_0579 SSIL_0579 SSIL_0597 SSIL_0597 SSIL_0660 SSIL_0660 SSIL_0812 SSIL_0812 SSIL_0813 SSIL_0813 SSIL_0815 SSIL_0815 SSIL_1038 SSIL_1038 SSIL_1093 SSIL_1093 SSIL_1142 SSIL_1142 SSIL_1203 SSIL_1203 SSIL_1204 SSIL_1204 SSIL_1344 SSIL_1344 SSIL_1403 SSIL_1403 radC radC yrzC yrzC lexA lexA SSIL_1802 SSIL_1802 SSIL_1888 SSIL_1888 SSIL_2118 SSIL_2118 SSIL_3619 SSIL_3619 SSIL_2802 SSIL_2802 SSIL_2838 SSIL_2838 dnaG dnaG SSIL_3029 SSIL_3029 priA priA SSIL_3190 SSIL_3190 SSIL_3346 SSIL_3346 SSIL_3585 SSIL_3585 SSIL_0010 SSIL_0010 rnmV rnmV SSIL_0091 SSIL_0091 SSIL_2792 SSIL_2792 SSIL_2741 SSIL_2741 SSIL_2685 SSIL_2685 yozA yozA SSIL_2150 SSIL_2150 SSIL_0127 SSIL_0127
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SSIL_0131Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (450 aa)
SSIL_0285Small primase-like protein. (114 aa)
SSIL_0383Transcriptional regulator. (282 aa)
ycbLResponse regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (232 aa)
SSIL_0579Transcriptional regulator. (332 aa)
SSIL_0597Transcriptional regulator. (281 aa)
SSIL_0660Fe2+/Zn2+ uptake regulation protein; Belongs to the Fur family. (148 aa)
SSIL_0812Replicative DNA helicase. (423 aa)
SSIL_0813Hypothetical protein. (242 aa)
SSIL_0815Superfamily II DNA helicase. (1097 aa)
SSIL_1038Small primase-like protein. (108 aa)
SSIL_1093DnaK suppressor protein. (114 aa)
SSIL_1142Transcriptional regulator. (332 aa)
SSIL_1203Replication initiation/membrane attachment protein. (915 aa)
SSIL_1204DNA replication protein. (319 aa)
SSIL_1344DnaK suppressor protein. (227 aa)
SSIL_1403Predicted ATPase. (796 aa)
radCDNA repair protein; Belongs to the UPF0758 family. (232 aa)
yrzCPredicted transcriptional regulator. (139 aa)
lexASOS-response transcriptional repressors; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. (207 aa)
SSIL_1802Hypothetical protein. (151 aa)
SSIL_1888Predicted transcriptional regulator. (106 aa)
SSIL_2118Superfamily II DNA helicase. (587 aa)
SSIL_3619Transcriptional regulator. (216 aa)
SSIL_2802Predicted transcriptional regulator. (113 aa)
SSIL_2838Fe2+/Zn2+ uptake regulation protein; Belongs to the Fur family. (136 aa)
dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (609 aa)
SSIL_3029Transcriptional regulator. (328 aa)
priAPrimosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (802 aa)
SSIL_3190Uncharacterized conserved protein. (140 aa)
SSIL_3346DNA repair protein. (154 aa)
SSIL_3585Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (228 aa)
SSIL_0010Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (311 aa)
rnmVSmall primase-like protein; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step. (213 aa)
SSIL_0091Transcriptional regulator. (214 aa)
SSIL_2792Fe2+/Zn2+ uptake regulation protein; Belongs to the Fur family. (155 aa)
SSIL_2741Superfamily II DNA helicase. (481 aa)
SSIL_2685Putative primosome component. (243 aa)
yozAPredicted transcriptional regulator. (103 aa)
SSIL_2150Predicted transcriptional regulator. (104 aa)
SSIL_0127Transcriptional regulator. (328 aa)
Your Current Organism:
Solibacillus silvestris
NCBI taxonomy Id: 1002809
Other names: S. silvestris StLB046, Solibacillus silvestris StLB046, Solibacillus silvestris str. StLB046, Solibacillus silvestris strain StLB046
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