STRINGSTRING
SSIL_3510 SSIL_3510 SSIL_3598 SSIL_3598 SSIL_2969 SSIL_2969 SSIL_0814 SSIL_0814 SSIL_0424 SSIL_0424 SSIL_0266 SSIL_0266 SSIL_0196 SSIL_0196 SSIL_0147 SSIL_0147 SSIL_1476 SSIL_1476 SSIL_1517 SSIL_1517 SSIL_1614 SSIL_1614 SSIL_1657 SSIL_1657 SSIL_1734 SSIL_1734 SSIL_1791 SSIL_1791 SSIL_1855 SSIL_1855 SSIL_1900 SSIL_1900 SSIL_2266 SSIL_2266 SSIL_2309 SSIL_2309 SSIL_2331 SSIL_2331 SSIL_2335 SSIL_2335 SSIL_2337 SSIL_2337 SSIL_2531 SSIL_2531 SSIL_2557 SSIL_2557 SSIL_2592 SSIL_2592 SSIL_2770 SSIL_2770 sigA sigA SSIL_3022 SSIL_3022 SSIL_3090 SSIL_3090 SSIL_3091 SSIL_3091 SSIL_1027 SSIL_1027
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SSIL_3510DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (181 aa)
SSIL_3598DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (164 aa)
SSIL_2969DNA-directed RNA polymerase specialized sigma subunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (256 aa)
SSIL_0814DNA-directed RNA polymerase; Belongs to the sigma-70 factor family. (425 aa)
SSIL_0424DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family. (261 aa)
SSIL_0266DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family. ECF subfamily. (187 aa)
SSIL_0196DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family. (215 aa)
SSIL_0147DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family. ECF subfamily. (177 aa)
SSIL_1476DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family. ECF subfamily. (181 aa)
SSIL_1517DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family. (233 aa)
SSIL_1614DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (164 aa)
SSIL_1657DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (158 aa)
SSIL_1734DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (164 aa)
SSIL_1791DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (165 aa)
SSIL_1855DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (175 aa)
SSIL_1900DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (172 aa)
SSIL_2266DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (163 aa)
SSIL_2309DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (179 aa)
SSIL_2331DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (174 aa)
SSIL_2335DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (189 aa)
SSIL_2337DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (179 aa)
SSIL_2531Hypothetical protein. (183 aa)
SSIL_2557DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (161 aa)
SSIL_2592DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. (158 aa)
SSIL_2770DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (177 aa)
sigADNA-directed RNA polymerase, sigma subunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (375 aa)
SSIL_3022Uncharacterized protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein. (111 aa)
SSIL_3090DNA-directed RNA polymerase specialized sigma subunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (256 aa)
SSIL_3091DNA-directed RNA polymerase specialized sigma subunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (236 aa)
SSIL_1027DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (174 aa)
Your Current Organism:
Solibacillus silvestris
NCBI taxonomy Id: 1002809
Other names: S. silvestris StLB046, Solibacillus silvestris StLB046, Solibacillus silvestris str. StLB046, Solibacillus silvestris strain StLB046
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