STRINGSTRING
SSIL_0036 SSIL_0036 SSIL_0091 SSIL_0091 SSIL_0094 SSIL_0094 yycF yycF SSIL_0147 SSIL_0147 SSIL_0166 SSIL_0166 SSIL_0196 SSIL_0196 SSIL_0213 SSIL_0213 bceR bceR SSIL_0266 SSIL_0266 SSIL_0282 SSIL_0282 SSIL_0300 SSIL_0300 SSIL_0304 SSIL_0304 SSIL_0328 SSIL_0328 SSIL_0383 SSIL_0383 SSIL_0388 SSIL_0388 mntR mntR SSIL_0394 SSIL_0394 SSIL_0424 SSIL_0424 rex rex SSIL_0442 SSIL_0442 SSIL_0451 SSIL_0451 ycbL ycbL SSIL_0537 SSIL_0537 SSIL_0569 SSIL_0569 SSIL_0597 SSIL_0597 SSIL_0622 SSIL_0622 recX recX SSIL_0660 SSIL_0660 SSIL_0662 SSIL_0662 SSIL_0704 SSIL_0704 yxdJ yxdJ SSIL_0772 SSIL_0772 SSIL_0814 SSIL_0814 SSIL_0825 SSIL_0825 SSIL_0851 SSIL_0851 SSIL_0859 SSIL_0859 SSIL_0861 SSIL_0861 SSIL_0906 SSIL_0906 SSIL_0932 SSIL_0932 SSIL_0957 SSIL_0957 SSIL_0982 SSIL_0982 SSIL_0994 SSIL_0994 SSIL_1027 SSIL_1027 gltC gltC SSIL_1123 SSIL_1123 SSIL_1136 SSIL_1136 SSIL_1174 SSIL_1174 SSIL_1178 SSIL_1178 phoP phoP SSIL_1235 SSIL_1235 ywfK ywfK gerE gerE ysmB ysmB SSIL_1353 SSIL_1353 SSIL_1360 SSIL_1360 SSIL_1476 SSIL_1476 SSIL_1477 SSIL_1477 SSIL_1479 SSIL_1479 ruvB ruvB SSIL_1517 SSIL_1517 lexA lexA yrzC yrzC SSIL_1614 SSIL_1614 SSIL_1628 SSIL_1628 SSIL_1654 SSIL_1654 SSIL_1657 SSIL_1657 ykoG ykoG argR argR SSIL_1707 SSIL_1707 SSIL_1734 SSIL_1734 SSIL_1751 SSIL_1751 SSIL_1791 SSIL_1791 SSIL_1855 SSIL_1855 SSIL_1877 SSIL_1877 SSIL_1888 SSIL_1888 SSIL_1900 SSIL_1900 SSIL_1916 SSIL_1916 SSIL_1920 SSIL_1920 SSIL_1933 SSIL_1933 SSIL_1942 SSIL_1942 SSIL_1954 SSIL_1954 ytcD ytcD SSIL_2010 SSIL_2010 SSIL_2035 SSIL_2035 SSIL_2104 SSIL_2104 SSIL_2118 SSIL_2118 SSIL_2130 SSIL_2130 SSIL_2146 SSIL_2146 SSIL_2150 SSIL_2150 SSIL_2154 SSIL_2154 yozA yozA SSIL_2248 SSIL_2248 SSIL_2266 SSIL_2266 SSIL_2309 SSIL_2309 lrpC lrpC SSIL_2331 SSIL_2331 SSIL_2335 SSIL_2335 SSIL_2337 SSIL_2337 nsrR nsrR SSIL_2399 SSIL_2399 SSIL_2410 SSIL_2410 SSIL_2434 SSIL_2434 SSIL_2557 SSIL_2557 SSIL_2566 SSIL_2566 SSIL_2568 SSIL_2568 SSIL_2592 SSIL_2592 SSIL_2605 SSIL_2605 SSIL_2611 SSIL_2611 SSIL_2645 SSIL_2645 SSIL_2659 SSIL_2659 SSIL_2663 SSIL_2663 SSIL_2685 SSIL_2685 birA birA SSIL_2753 SSIL_2753 SSIL_2756 SSIL_2756 SSIL_2770 SSIL_2770 resD resD scpB scpB SSIL_2792 SSIL_2792 SSIL_2802 SSIL_2802 SSIL_2806 SSIL_2806 SSIL_2838 SSIL_2838 sigA sigA yqzB yqzB SSIL_2860 SSIL_2860 hrcA hrcA ymfC ymfC SSIL_2935 SSIL_2935 SSIL_2942 SSIL_2942 codY codY SSIL_3022 SSIL_3022 fapR fapR SSIL_3090 SSIL_3090 SSIL_3091 SSIL_3091 ykuM ykuM SSIL_3184 SSIL_3184 SSIL_3461 SSIL_3461 SSIL_3480 SSIL_3480 SSIL_3497 SSIL_3497 SSIL_3506 SSIL_3506 SSIL_3510 SSIL_3510 SSIL_3563 SSIL_3563 SSIL_3585 SSIL_3585 SSIL_3598 SSIL_3598 SSIL_3619 SSIL_3619 SSIL_3624 SSIL_3624 SSIL_3635 SSIL_3635 SSIL_3672 SSIL_3672 SSIL_3713 SSIL_3713 SSIL_3755 SSIL_3755 SSIL_3781 SSIL_3781 SSIL_3790 SSIL_3790
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SSIL_0036Adenine/guanine phosphoribosyltransferase. (277 aa)
SSIL_0091Transcriptional regulator. (214 aa)
SSIL_0094GntR family transcriptional regulator / MocR family aminotransferase; Transcriptional regulator containing a DNA-binding HTH domain and an aminotransferase domain and their eukaryotic orthologs. (467 aa)
yycFResponse regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (237 aa)
SSIL_0147DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family. ECF subfamily. (177 aa)
SSIL_0166Methylated DNA-protein cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. (159 aa)
SSIL_0196DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family. (215 aa)
SSIL_0213Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (295 aa)
bceRResponse regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (226 aa)
SSIL_0266DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family. ECF subfamily. (187 aa)
SSIL_0282Transposase. (156 aa)
SSIL_0300Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (295 aa)
SSIL_0304Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (286 aa)
SSIL_0328Predicted transcriptional regulator. (104 aa)
SSIL_0383Transcriptional regulator. (282 aa)
SSIL_0388Predicted transcriptional regulator. (101 aa)
mntRMn-dependent transcriptional regulator; Central regulator of manganese homeostasis. Belongs to the DtxR/MntR family. (146 aa)
SSIL_0394Uncharacterized protein; Belongs to the CvfB family. (285 aa)
SSIL_0424DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family. (261 aa)
rexAT-rich DNA-binding protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state. (211 aa)
SSIL_0442Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (295 aa)
SSIL_0451Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. (204 aa)
ycbLResponse regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (232 aa)
SSIL_0537Transcriptional regulator. (142 aa)
SSIL_0569Predicted transcriptional regulator. (115 aa)
SSIL_0597Transcriptional regulator. (281 aa)
SSIL_0622Sugar kinase. (362 aa)
recXUncharacterized protein; Modulates RecA activity; Belongs to the RecX family. (271 aa)
SSIL_0660Fe2+/Zn2+ uptake regulation protein; Belongs to the Fur family. (148 aa)
SSIL_0662Hypothetical protein. (297 aa)
SSIL_0704Transcriptional regulator. (185 aa)
yxdJResponse regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (234 aa)
SSIL_0772Transcriptional regulator. (342 aa)
SSIL_0814DNA-directed RNA polymerase; Belongs to the sigma-70 factor family. (425 aa)
SSIL_0825Transcriptional regulator. (251 aa)
SSIL_0851Gamma-glutamyltransferase. (87 aa)
SSIL_0859Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (292 aa)
SSIL_0861Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (304 aa)
SSIL_0906Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (286 aa)
SSIL_0932Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (305 aa)
SSIL_0957Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (232 aa)
SSIL_0982Predicted transcriptional regulator. (125 aa)
SSIL_0994Transcriptional regulator. (233 aa)
SSIL_1027DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (174 aa)
gltCTranscriptional regulator; Belongs to the LysR transcriptional regulatory family. (300 aa)
SSIL_1123Transcriptional regulator of sugar metabolism. (73 aa)
SSIL_1136DNA segregation ATPase FtsK/SpoIIIE; Belongs to the FtsK/SpoIIIE/SftA family. (1057 aa)
SSIL_1174Predicted transcriptional regulator containing CBS domains. (435 aa)
SSIL_1178Transcriptional regulator. (211 aa)
phoPResponse regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (236 aa)
SSIL_1235Putative regulatory, ligand-binding protein. (218 aa)
ywfKTranscriptional regulator; Belongs to the LysR transcriptional regulatory family. (297 aa)
gerEDNA-binding HTH domain-containing protein. (73 aa)
ysmBTranscriptional regulator. (147 aa)
SSIL_1353Predicted transcriptional regulator. (142 aa)
SSIL_1360Transposase. (186 aa)
SSIL_1476DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family. ECF subfamily. (181 aa)
SSIL_1477Predicted transcriptional regulator. (131 aa)
SSIL_1479Predicted small molecule binding protein. (175 aa)
ruvBHolliday junction resolvasome, helicase subunit; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (334 aa)
SSIL_1517DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family. (233 aa)
lexASOS-response transcriptional repressors; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. (207 aa)
yrzCPredicted transcriptional regulator. (139 aa)
SSIL_1614DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (164 aa)
SSIL_1628Predicted transcriptional regulator. (232 aa)
SSIL_1654Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (236 aa)
SSIL_1657DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (158 aa)
ykoGResponse regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (234 aa)
argRArginine repressor; Regulates arginine biosynthesis genes. (149 aa)
SSIL_1707Stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. (263 aa)
SSIL_1734DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (164 aa)
SSIL_1751Transcriptional regulator. (139 aa)
SSIL_1791DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (165 aa)
SSIL_1855DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (175 aa)
SSIL_1877Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. (232 aa)
SSIL_1888Predicted transcriptional regulator. (106 aa)
SSIL_1900DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (172 aa)
SSIL_1916Transposase. (106 aa)
SSIL_1920Transposase. (56 aa)
SSIL_1933Transposase. (186 aa)
SSIL_1942Predicted transcriptional regulator. (181 aa)
SSIL_1954Predicted transcriptional regulator. (123 aa)
ytcDPredicted transcriptional regulator. (127 aa)
SSIL_2010Predicted transcriptional regulator. (105 aa)
SSIL_2035Transcriptional regulator. (144 aa)
SSIL_2104Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (223 aa)
SSIL_2118Superfamily II DNA helicase. (587 aa)
SSIL_2130Transcriptional regulator. (233 aa)
SSIL_2146Hypothetical protein. (169 aa)
SSIL_2150Predicted transcriptional regulator. (104 aa)
SSIL_2154Transcriptional regulator. (148 aa)
yozAPredicted transcriptional regulator. (103 aa)
SSIL_2248Predicted transcriptional regulator. (107 aa)
SSIL_2266DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (163 aa)
SSIL_2309DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (179 aa)
lrpCTranscriptional regulator. (136 aa)
SSIL_2331DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (174 aa)
SSIL_2335DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (189 aa)
SSIL_2337DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (179 aa)
nsrRPredicted transcriptional regulator. (153 aa)
SSIL_2399Transcriptional regulator. (144 aa)
SSIL_2410Transcriptional regulator. (243 aa)
SSIL_2434Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (226 aa)
SSIL_2557DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (161 aa)
SSIL_2566Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (222 aa)
SSIL_2568Transcriptional regulator containing a DNA-binding HTH domain and an aminotransferase domain. (458 aa)
SSIL_2592DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. (158 aa)
SSIL_2605Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (290 aa)
SSIL_2611Transcriptional regulator. (132 aa)
SSIL_2645Predicted transcriptional regulator. (104 aa)
SSIL_2659Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (294 aa)
SSIL_2663Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (304 aa)
SSIL_2685Putative primosome component. (243 aa)
birAbiotin-(acetyl-CoA carboxylase) ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. (328 aa)
SSIL_2753Transcriptional regulator. (137 aa)
SSIL_2756Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (293 aa)
SSIL_2770DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (177 aa)
resDResponse regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (238 aa)
scpBPredicted transcriptional regulator containing the HTH domain; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. (196 aa)
SSIL_2792Fe2+/Zn2+ uptake regulation protein; Belongs to the Fur family. (155 aa)
SSIL_2802Predicted transcriptional regulator. (113 aa)
SSIL_2806Predicted transcriptional regulator. (120 aa)
SSIL_2838Fe2+/Zn2+ uptake regulation protein; Belongs to the Fur family. (136 aa)
sigADNA-directed RNA polymerase, sigma subunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (375 aa)
yqzBFOG: CBS domain. (215 aa)
SSIL_2860Transcriptional regulator. (257 aa)
hrcATranscriptional regulator of heat shock gene; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. (341 aa)
ymfCTranscriptional regulator. (242 aa)
SSIL_2935DNA segregation ATPase FtsK/SpoIIIE; Belongs to the FtsK/SpoIIIE/SftA family. (765 aa)
SSIL_2942Predicted transcriptional regulator. (123 aa)
codYPleiotropic transcriptional repressor; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family. (259 aa)
SSIL_3022Uncharacterized protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein. (111 aa)
fapRUncharacterized protein; Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism. (190 aa)
SSIL_3090DNA-directed RNA polymerase specialized sigma subunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (256 aa)
SSIL_3091DNA-directed RNA polymerase specialized sigma subunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (236 aa)
ykuMTranscriptional regulator; Belongs to the LysR transcriptional regulatory family. (299 aa)
SSIL_3184Transcriptional regulator. (148 aa)
SSIL_3461Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (225 aa)
SSIL_3480Predicted transcriptional regulator. (320 aa)
SSIL_3497Transcriptional regulator. (138 aa)
SSIL_3506Transcriptional regulator. (141 aa)
SSIL_3510DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (181 aa)
SSIL_3563Predicted transcriptional regulator. (179 aa)
SSIL_3585Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (228 aa)
SSIL_3598DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (164 aa)
SSIL_3619Transcriptional regulator. (216 aa)
SSIL_3624Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (222 aa)
SSIL_3635ATP-dependent transcriptional regulator. (1043 aa)
SSIL_3672Response regulator of citrate/malate metabolism. (229 aa)
SSIL_3713Transcriptional regulator. (253 aa)
SSIL_3755Transcriptional regulator/sugar kinase. (385 aa)
SSIL_3781Predicted transcriptional regulator. (123 aa)
SSIL_3790Transcriptional regulator. (234 aa)
Your Current Organism:
Solibacillus silvestris
NCBI taxonomy Id: 1002809
Other names: S. silvestris StLB046, Solibacillus silvestris StLB046, Solibacillus silvestris str. StLB046, Solibacillus silvestris strain StLB046
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