(21 nodes) Reverse transcriptase/Diguanylate cyclase domain network (Solibacillus silvestris)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	SSIL_0839	FOG: GGDEF domain. (205 aa)
	SSIL_2533	FOG: GGDEF domain. (328 aa)
	SSIL_2675	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. (582 aa)
	SSIL_3329	FOG: GGDEF domain. (521 aa)
	SSIL_3416	FOG: GGDEF domain. (359 aa)
	SSIL_3417	FOG: GGDEF domain. (359 aa)
	SSIL_1157	FOG: GGDEF domain. (620 aa)
	SSIL_0971	FOG: GGDEF domain. (567 aa)
	SSIL_3465	nucleotidyltransferase/DNA polymerase; Belongs to the DNA polymerase type-Y family. (417 aa)
	SSIL_3550	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. (667 aa)
	SSIL_0462	FOG: EAL domain. (686 aa)
	SSIL_0324	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. (567 aa)
	SSIL_1297	FOG: GGDEF domain. (315 aa)
	SSIL_1539	FOG: EAL domain. (729 aa)
	SSIL_1563	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. (727 aa)
	SSIL_1913	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. (608 aa)
	SSIL_1915	FOG: GGDEF domain. (314 aa)
	SSIL_2058	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. (835 aa)
	SSIL_2103	FOG: GGDEF domain. (670 aa)
	dinB	nucleotidyltransferase/DNA polymerase; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. (410 aa)
	SSIL_2405	Response regulator containing a CheY-like receiver domain and a GGDEF domain. (545 aa)

Your Current Organism:

Solibacillus silvestris

NCBI taxonomy Id: 1002809
Other names: S. silvestris StLB046, Solibacillus silvestris StLB046, Solibacillus silvestris str. StLB046, Solibacillus silvestris strain StLB046

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SSIL_0324	SSIL_0462	SSIL_0324	SSIL_0462	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	FOG: EAL domain.	0.883
SSIL_0324	SSIL_0839	SSIL_0324	SSIL_0839	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	FOG: GGDEF domain.	0.523
SSIL_0324	SSIL_0971	SSIL_0324	SSIL_0971	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	FOG: GGDEF domain.	0.873
SSIL_0324	SSIL_1157	SSIL_0324	SSIL_1157	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	FOG: GGDEF domain.	0.810
SSIL_0324	SSIL_1297	SSIL_0324	SSIL_1297	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	FOG: GGDEF domain.	0.791
SSIL_0324	SSIL_1539	SSIL_0324	SSIL_1539	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	FOG: EAL domain.	0.935
SSIL_0324	SSIL_1563	SSIL_0324	SSIL_1563	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	0.810
SSIL_0324	SSIL_1913	SSIL_0324	SSIL_1913	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	0.918
SSIL_0324	SSIL_1915	SSIL_0324	SSIL_1915	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	FOG: GGDEF domain.	0.792
SSIL_0324	SSIL_2058	SSIL_0324	SSIL_2058	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	0.927
SSIL_0324	SSIL_2103	SSIL_0324	SSIL_2103	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	FOG: GGDEF domain.	0.801
SSIL_0324	SSIL_2405	SSIL_0324	SSIL_2405	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	Response regulator containing a CheY-like receiver domain and a GGDEF domain.	0.958
SSIL_0324	SSIL_2533	SSIL_0324	SSIL_2533	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	FOG: GGDEF domain.	0.547
SSIL_0324	SSIL_2675	SSIL_0324	SSIL_2675	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	0.915
SSIL_0324	SSIL_3329	SSIL_0324	SSIL_3329	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	FOG: GGDEF domain.	0.551
SSIL_0324	SSIL_3416	SSIL_0324	SSIL_3416	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	FOG: GGDEF domain.	0.848
SSIL_0324	SSIL_3417	SSIL_0324	SSIL_3417	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	FOG: GGDEF domain.	0.848
SSIL_0324	SSIL_3550	SSIL_0324	SSIL_3550	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	0.929
SSIL_0462	SSIL_0324	SSIL_0462	SSIL_0324	FOG: EAL domain.	Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	0.883
SSIL_0462	SSIL_0839	SSIL_0462	SSIL_0839	FOG: EAL domain.	FOG: GGDEF domain.	0.837

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