STRINGSTRING
I79_020017 I79_020017 Il15ra Il15ra I79_005573 I79_005573 Runx2 Runx2 Tnfsf11 Tnfsf11 I79_012286 I79_012286 Zfyve1 Zfyve1 Stag1 Stag1 Hmgn5 Hmgn5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I79_020017Nucleosome-binding protein 1. (109 aa)
Il15raInterleukin-15 receptor subunit alpha-like protein. (264 aa)
I79_005573Secreted frizzled-related protein 2. (268 aa)
Runx2Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. (365 aa)
Tnfsf11Tumor necrosis factor ligand superfamily member 11; Belongs to the tumor necrosis factor family. (199 aa)
I79_012286Zinc finger FYVE domain-containing protein 1. (211 aa)
Zfyve1Zinc finger FYVE domain-containing protein 1. (513 aa)
Stag1Cohesin subunit SA-1. (757 aa)
Hmgn5Nucleosome-binding protein 1. (297 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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