STRINGSTRING
Trmt44 Trmt44 I79_002038 I79_002038 I79_002039 I79_002039 Tarbp1 Tarbp1 Mnd1 Mnd1 Htatsf1 Htatsf1 I79_007152 I79_007152 Swt1 Swt1 I79_007569 I79_007569 Psmc3ip Psmc3ip Apbb3 Apbb3 Atp2a1 Atp2a1 Catip Catip Thumpd1 Thumpd1 I79_025509 I79_025509 I79_025692 I79_025692
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Trmt44Putative tRNA (Uracil-O(2)-)-methyltransferase. (241 aa)
I79_002038Putative tRNA (Uracil-O(2)-)-methyltransferase. (196 aa)
I79_002039Putative tRNA (Uracil-O(2)-)-methyltransferase. (169 aa)
Tarbp1Putative methyltransferase TARBP1. (1048 aa)
Mnd1Meiotic nuclear division protein 1 homolog; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Belongs to the MND1 family. (180 aa)
Htatsf1HIV Tat-specific factor 1-like. (528 aa)
I79_007152tRNA (guanine(26)-N(2))-dimethyltransferase. (665 aa)
Swt1Uncharacterized protein C1orf26-like. (340 aa)
I79_007569Meiotic nuclear division protein 1 homolog; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Belongs to the MND1 family. (162 aa)
Psmc3ipHomologous-pairing protein 2-like. (217 aa)
Apbb3Amyloid beta A4 protein-binding family B member 3. (187 aa)
Atp2a1Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. (1475 aa)
CatipUncharacterized protein C2orf62. (464 aa)
Thumpd1THUMP domain-containing protein 1. (359 aa)
I79_025509tRNA guanosine-2'-O-methyltransferase TRM13-like. (214 aa)
I79_025692tRNA guanosine-2'-O-methyltransferase TRM13-like. (87 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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