STRINGSTRING
I79_000137 I79_000137 Pdx1 Pdx1 Pax4 Pax4 Pax6 Pax6 I79_004859 I79_004859 Ptf1a Ptf1a Neurog3 Neurog3 Vsx1 Vsx1 I79_007350 I79_007350 I79_009248 I79_009248 I79_010330 I79_010330 Foxn4 Foxn4 I79_012324 I79_012324 Foxa2 Foxa2 Hnf4a Hnf4a Neurod4 Neurod4 Barhl2 Barhl2 Klf11 Klf11 I79_018615 I79_018615 Hnf1b Hnf1b Mnx1 Mnx1 I79_020506 I79_020506 Sim1 Sim1 I79_024779 I79_024779
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I79_000137One cut domain family member. (431 aa)
Pdx1Pancreas/duodenum homeobox protein 1. (283 aa)
Pax4Paired box protein Pax-4. (231 aa)
Pax6Paired box protein Pax-6. (544 aa)
I79_004859Protein atonal-like 1. (293 aa)
Ptf1aPancreas transcription factor 1 subunit alpha. (152 aa)
Neurog3Neurogenin-3. (214 aa)
Vsx1Visual system homeobox 1. (226 aa)
I79_007350Protein atonal-like 7. (65 aa)
I79_009248One cut domain family member 3. (170 aa)
I79_010330Hepatocyte nuclear factor 1-alpha. (668 aa)
Foxn4Forkhead box protein N4. (484 aa)
I79_012324Visual system homeobox 2. (361 aa)
Foxa2Hepatocyte nuclear factor 3-beta. (430 aa)
Hnf4aHepatocyte nuclear factor 4-alpha. (464 aa)
Neurod4Neurogenic differentiation factor. (331 aa)
Barhl2BarH-like 2 homeobox protein. (410 aa)
Klf11Krueppel-like factor 11. (485 aa)
I79_018615DNA-binding protein RFX6. (582 aa)
Hnf1bHepatocyte nuclear factor 1-beta. (593 aa)
Mnx1Motor neuron and pancreas homeobox protein 1. (226 aa)
I79_020506POU domain, class 4, transcription factor 2. (207 aa)
Sim1Putative single-minded. (765 aa)
I79_024779Homeobox protein Nkx-6.1. (99 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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