STRINGSTRING
I79_001258 I79_001258 Map2 Map2 Calb2 Calb2 Pxdn Pxdn I79_009594 I79_009594 Vim Vim CgPICR_002764 CgPICR_002764 CgPICR_020194 CgPICR_020194 CgPICR_000709 CgPICR_000709 I79_011213 I79_011213 Gfap Gfap CgPICR_013910 CgPICR_013910 H671_2g6716 H671_2g6716 I79_016663 I79_016663 CgPICR_017546 CgPICR_017546 Sdf4 Sdf4 Des Des Alb Alb CgPICR_012401 CgPICR_012401 I79_022257 I79_022257 Pvalb Pvalb I79_025220 I79_025220
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I79_001258Glutamate decarboxylase 1. (732 aa)
Map2Microtubule-associated protein. (1608 aa)
Calb2Calretinin. (271 aa)
PxdnPeroxidasin-like. (1475 aa)
I79_009594Nestin; Belongs to the intermediate filament family. (1800 aa)
VimVimentin; Belongs to the intermediate filament family. (466 aa)
CgPICR_002764Glyceraldehyde-3-phosphate dehydrogenase. (77 aa)
CgPICR_020194Glyceraldehyde-3-phosphate dehydrogenase. (105 aa)
CgPICR_000709Glyceraldehyde-3-phosphate dehydrogenase. (148 aa)
I79_011213Synemin. (1315 aa)
GfapGlial fibrillary acidic protein; Belongs to the intermediate filament family. (427 aa)
CgPICR_013910Glyceraldehyde-3-phosphate dehydrogenase. (104 aa)
H671_2g6716Calbindin-like protein. (211 aa)
I79_016663Vesicular glutamate transporter 1. (468 aa)
CgPICR_017546Glyceraldehyde-3-phosphate dehydrogenase. (127 aa)
Sdf445 kDa calcium-binding protein. (355 aa)
DesDesmin; Belongs to the intermediate filament family. (471 aa)
AlbSerum albumin. (430 aa)
CgPICR_012401Glyceraldehyde-3-phosphate dehydrogenase. (75 aa)
I79_022257Actin. (98 aa)
PvalbParvalbumin alpha; Belongs to the parvalbumin family. (103 aa)
I79_025220Serum albumin. (186 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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