STRINGSTRING
Gdi2 Gdi2 Rab3gap2 Rab3gap2 Trappc2l Trappc2l Sec22a Sec22a Trappc11 Trappc11 I79_000713 I79_000713 I79_000735 I79_000735 Tmed3 Tmed3 Cog1 Cog1 I79_001259 I79_001259 Vps41 Vps41 Kdelr2 Kdelr2 Usp6nl Usp6nl Rabggtb Rabggtb Stx18 Stx18 Rasl11a Rasl11a Stx16 Stx16 Cog2 Cog2 Vps50 Vps50 I79_002478 I79_002478 I79_002690 I79_002690 Trappc1 Trappc1 Stx19 Stx19 Arfgap2 Arfgap2 Copg2 Copg2 I79_003223 I79_003223 Vamp4 Vamp4 I79_003347 I79_003347 I79_003804 I79_003804 Vps39 Vps39 Rab1a Rab1a Tmed9 Tmed9 I79_004066 I79_004066 Stx12 Stx12 Vps33a Vps33a I79_004349 I79_004349 Rab18 Rab18 Rab33a Rab33a Vps16 Vps16 Cope Cope Use1 Use1 Smim7 Smim7 Scfd1 Scfd1 I79_005553 I79_005553 Tgfbrap1 Tgfbrap1 Copz2 Copz2 Vipas39 Vipas39 Chml Chml Stx11 Stx11 Stx6 Stx6 Copa Copa Slc25a30 Slc25a30 Mon1a Mon1a I79_006760 I79_006760 I79_006855 I79_006855 Mon1b Mon1b Sec22c Sec22c Bnip1 Bnip1 Trappc3 Trappc3 Cog4 Cog4 Golgb1 Golgb1 I79_007445 I79_007445 Rab33b Rab33b Rab26 Rab26 I79_008149 I79_008149 Rabggta Rabggta I79_008636 I79_008636 Nbas Nbas Tmed10 Tmed10 Snap29 Snap29 Rab19 Rab19 I79_009877 I79_009877 I79_009893 I79_009893 Ccdc70 Ccdc70 Copg1 Copg1 Rab43 Rab43 Gcc2 Gcc2 I79_011243 I79_011243 Ykt6 Ykt6 Tmed4 Tmed4 Tbc1d25 Tbc1d25 Sec22b Sec22b Trappc6a Trappc6a Vamp5 Vamp5 Vamp8 Vamp8 Gorasp1 Gorasp1 I79_013357 I79_013357 Stx17 Stx17 I79_013748 I79_013748 I79_013776 I79_013776 I79_014064 I79_014064 Vps53 Vps53 Rab30 Rab30 Vamp7 Vamp7 I79_014998 I79_014998 Rab2b Rab2b Trappc5 Trappc5 Tmed2 Tmed2 Trappc13 Trappc13 Arfgap3 Arfgap3 Gbf1 Gbf1 I79_016379 I79_016379 Arpc5l Arpc5l I79_016500 I79_016500 Cog8 Cog8 H671_4g11467 H671_4g11467 Napa Napa I79_017134 I79_017134 Rab9a Rab9a Rab1b Rab1b I79_017896 I79_017896 Eipr1 Eipr1 Trappc12 Trappc12 I79_018099 I79_018099 H671_2g6052 H671_2g6052 Arcn1 Arcn1 I79_019033 I79_019033 Arf3 Arf3 I79_019164 I79_019164 Vps52 Vps52 I79_019433 I79_019433 Pdcd1lg2 Pdcd1lg2 Cog6 Cog6 I79_019573 I79_019573 I79_019679 I79_019679 I79_019971 I79_019971 I79_020027 I79_020027 Vps11 Vps11 Trappc4 Trappc4 I79_020190 I79_020190 Surf4 Surf4 Rab6a Rab6a Trappc9 Trappc9 Rab9b Rab9b Vti1a Vti1a Kdelr1 Kdelr1 Gdi1 Gdi1 Stx7 Stx7 I79_021271 I79_021271 Vps18 Vps18 I79_022481 I79_022481 Arl9 Arl9 H671_xg20327 H671_xg20327 Cog7 Cog7 Rab34 Rab34 I79_023329 I79_023329 Vps33b Vps33b I79_023474 I79_023474 Stx5 Stx5 Vps51 Vps51 Snx15 Snx15 Kdelr3 Kdelr3 Trappc6b Trappc6b Armc5 Armc5 CgPICR_008620 CgPICR_008620 I79_024396 I79_024396 Plekhm2 Plekhm2 Zw10 Zw10 I79_024878 I79_024878 Bet1l Bet1l I79_025127 I79_025127 CgPICR_016864 CgPICR_016864 I79_025800 I79_025800 Gosr2 Gosr2 I79_025997 I79_025997 I79_026015 I79_026015 I79_026064 I79_026064 I79_026104 I79_026104 I79_026115 I79_026115
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Gdi2Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (445 aa)
Rab3gap2Rab3 GTPase-activating protein non-catalytic subunit. (1302 aa)
Trappc2lTrafficking protein particle complex subunit 2-like protein. (109 aa)
Sec22aVesicle-trafficking protein SEC22a; Belongs to the synaptobrevin family. (307 aa)
Trappc11UPF0636 protein C4orf41-like. (1025 aa)
I79_000713UPF0636 protein C4orf41. (142 aa)
I79_000735Coatomer subunit beta. (791 aa)
Tmed3Transmembrane emp24 domain-containing protein 3. (220 aa)
Cog1Conserved oligomeric Golgi complex subunit 1. (876 aa)
I79_001259Golgi reassembly-stacking protein 2. (111 aa)
Vps41Vacuolar protein sorting-associated protein 41-like. (191 aa)
Kdelr2ER lumen protein-retaining receptor. (150 aa)
Usp6nlRab-GAP TBC domain-containing protein. (821 aa)
RabggtbGeranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (219 aa)
Stx18Syntaxin-18. (334 aa)
Rasl11aRas-like protein family member 11A. (237 aa)
Stx16Syntaxin-16; Belongs to the syntaxin family. (326 aa)
Cog2Conserved oligomeric Golgi complex subunit 2. (186 aa)
Vps50Coiled-coil domain-containing protein 132. (964 aa)
I79_002478BET1-like. (118 aa)
I79_002690Syntaxin-8. (210 aa)
Trappc1Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (144 aa)
Stx19Syntaxin-19-like protein; Belongs to the syntaxin family. (292 aa)
Arfgap2ADP-ribosylation factor GTPase-activating protein 2. (520 aa)
Copg2Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (808 aa)
I79_003223Ras-related protein Rab-6B. (140 aa)
Vamp4Vesicle-associated membrane protein 4. (141 aa)
I79_003347Rab3 GTPase-activating protein catalytic subunit. (748 aa)
I79_003804Vam6/Vps39-like protein. (156 aa)
Vps39Vam6/Vps39-like protein. (507 aa)
Rab1aRas-like GTP-binding protein YPT1. (96 aa)
Tmed9Transmembrane emp24 domain-containing protein 9. (231 aa)
I79_004066Vesicle transport through interaction with t-SNAREs-like 1B. (326 aa)
Stx12Syntaxin-12; Belongs to the syntaxin family. (274 aa)
Vps33aVacuolar protein sorting-associated protein 33A; Belongs to the STXBP/unc-18/SEC1 family. (597 aa)
I79_004349Trafficking protein particle complex subunit 2. (140 aa)
Rab18Ras-related protein Rab-18. (206 aa)
Rab33aRas-related protein Rab-33A. (237 aa)
Vps16Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. (839 aa)
CopeCoatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family. (308 aa)
Use1Vesicle transport protein USE1. (271 aa)
Smim7Putative UPF0608 protein C19orf42 like protein. (75 aa)
Scfd1Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family. (634 aa)
I79_005553Gamma-soluble NSF attachment protein. (155 aa)
Tgfbrap1Transforming growth factor-beta receptor-associated protein 1. (809 aa)
Copz2Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (299 aa)
Vipas39Uncharacterized protein C14orf133-like. (491 aa)
ChmlRab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. (617 aa)
Stx11Syntaxin-11; Belongs to the syntaxin family. (287 aa)
Stx6Syntaxin-6; Belongs to the syntaxin family. (262 aa)
CopaCoatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (1224 aa)
Slc25a30Conserved oligomeric Golgi complex subunit 3; Belongs to the mitochondrial carrier (TC 2.A.29) family. (892 aa)
Mon1aVacuolar fusion protein MON1-like A. (555 aa)
I79_006760ADP-ribosylation factor 1. (168 aa)
I79_006855Periodic tryptophan protein 2-like. (1940 aa)
Mon1bPutative vacuolar fusion protein MON1. (558 aa)
Sec22cVesicle-trafficking protein SEC22c; Belongs to the synaptobrevin family. (303 aa)
Bnip1Vesicle transport protein SEC20. (228 aa)
Trappc3Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (180 aa)
Cog4Conserved oligomeric Golgi complex subunit 4. (785 aa)
Golgb1Golgin subfamily B member 1. (3035 aa)
I79_007445Golgin subfamily B member 1. (118 aa)
Rab33bRas-related protein Rab-33B-like protein. (229 aa)
Rab26Ras-related protein Rab-26. (255 aa)
I79_008149Ras-related protein Rab-15. (140 aa)
RabggtaGeranylgeranyl transferase type-2 subunit alpha. (567 aa)
I79_008636Vacuolar protein sorting-associated protein 54. (393 aa)
NbasNeuroblastoma-amplified sequence. (592 aa)
Tmed10Transmembrane emp24 domain-containing protein 10; Belongs to the EMP24/GP25L family. (130 aa)
Snap29Synaptosomal-associated protein 29. (192 aa)
Rab19Ras-related protein Rab-19. (218 aa)
I79_009877ADP-ribosylation factor GTPase-activating protein 1. (325 aa)
I79_009893ADP-ribosylation factor-related protein 1. (201 aa)
Ccdc70Coiled-coil domain-containing protein 70. (223 aa)
Copg1Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (874 aa)
Rab43Ras-related protein Rab-43. (201 aa)
Gcc2GRIP and coiled-coil domain-containing protein 2. (1681 aa)
I79_011243Vacuolar protein sorting-associated protein 8-like. (1283 aa)
Ykt6Synaptobrevin-like YKT6; Belongs to the synaptobrevin family. (191 aa)
Tmed4Transmembrane emp24 domain-containing protein 4. (227 aa)
Tbc1d25TBC1 domain family member 25. (688 aa)
Sec22bVesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family. (215 aa)
Trappc6aTrafficking protein particle complex subunit 6A. (54 aa)
Vamp5Vesicle-associated membrane protein 5. (84 aa)
Vamp8Vesicle-associated membrane protein 8. (101 aa)
Gorasp1Golgi reassembly-stacking protein 1. (441 aa)
I79_013357Golgi SNAP receptor complex member 1. (202 aa)
Stx17Syntaxin-17; Belongs to the syntaxin family. (263 aa)
I79_013748Ras-related protein Rab-1A. (103 aa)
I79_013776Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (870 aa)
I79_014064Protein TRS85-like. (932 aa)
Vps53Vacuolar protein sorting-associated protein 53-like. (832 aa)
Rab30Ras-related protein Rab-30. (201 aa)
Vamp7Vesicle-associated membrane protein 7-like isoform 1; Belongs to the synaptobrevin family. (220 aa)
I79_014998ADP-ribosylation factor 1. (86 aa)
Rab2bRas-related protein Rab-2B. (216 aa)
Trappc5Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (188 aa)
Tmed2Transmembrane emp24 domain-containing protein 2. (116 aa)
Trappc13UPF0533 protein C5orf44-like. (294 aa)
Arfgap3ADP-ribosylation factor GTPase-activating protein 3. (517 aa)
Gbf1Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1. (1857 aa)
I79_016379Liprin-alpha-1. (259 aa)
Arpc5lGolgin subfamily A member 2. (255 aa)
I79_016500Ribosomal protein S6 kinase alpha-6; Belongs to the protein kinase superfamily. (342 aa)
Cog8Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family. (632 aa)
H671_4g11467Ras-related protein Rab-39A-like protein. (87 aa)
NapaAlpha-soluble NSF attachment protein. (103 aa)
I79_017134Trafficking protein particle complex subunit 2. (163 aa)
Rab9aRas-related protein Rab-9A. (201 aa)
Rab1bRas-related protein Rab-1B. (201 aa)
I79_017896Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (427 aa)
Eipr1Protein TSSC1. (386 aa)
Trappc12Tetratricopeptide repeat protein 15. (797 aa)
I79_018099Beta-soluble NSF attachment protein. (281 aa)
H671_2g6052ADP-ribosylation factor-related protein 1. (140 aa)
Arcn1Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (511 aa)
I79_019033Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (211 aa)
Arf3ADP-ribosylation factor 3; Belongs to the small GTPase superfamily. Arf family. (181 aa)
I79_019164Trafficking protein particle complex subunit 9. (164 aa)
Vps52Vacuolar protein sorting-associated protein 52-like. (471 aa)
I79_019433Trafficking protein particle complex subunit 9. (247 aa)
Pdcd1lg2Protein RIC1-like. (1446 aa)
Cog6Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. (657 aa)
I79_019573Conserved oligomeric Golgi complex subunit 5. (258 aa)
I79_019679Rab proteins geranylgeranyltransferase component A 1. (365 aa)
I79_019971RAD50-interacting protein 1. (600 aa)
I79_020027TBC1 domain family member 20. (555 aa)
Vps11Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family. (965 aa)
Trappc4Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (219 aa)
I79_020190General vesicular transport factor p115. (754 aa)
Surf4Surfeit locus protein 4. (260 aa)
Rab6aRas-related protein Rab-6A. (108 aa)
Trappc9Trafficking protein particle complex subunit 9. (604 aa)
Rab9bRas-related protein Rab-9B. (197 aa)
Vti1aVesicle transport through interaction with t-SNAREs-like 1A. (219 aa)
Kdelr1ER lumen protein retaining receptor 1. (61 aa)
Gdi1Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (425 aa)
Stx7Syntaxin-7; Belongs to the syntaxin family. (261 aa)
I79_021271UPF0550 protein C7orf28-like. (480 aa)
Vps18Vacuolar protein sorting-associated protein 18-like. (973 aa)
I79_022481Golgin subfamily A member 2. (165 aa)
Arl9ADP-ribosylation factor-like protein 9. (411 aa)
H671_xg20327Syntaxin-3-like protein; Belongs to the syntaxin family. (298 aa)
Cog7Conserved oligomeric Golgi complex subunit 7. (770 aa)
Rab34Ras-related protein Rab-34. (259 aa)
I79_023329Syntaxin-5. (144 aa)
Vps33bVacuolar protein sorting-associated protein 33B; Belongs to the STXBP/unc-18/SEC1 family. (601 aa)
I79_023474Protein prenyltransferase alpha subunit repeat-containing protein 1. (122 aa)
Stx5Syntaxin-5; Belongs to the syntaxin family. (170 aa)
Vps51Protein fat-free-like. (595 aa)
Snx15Sorting nexin-15. (101 aa)
Kdelr3ER lumen protein retaining receptor 3. (138 aa)
Trappc6bTrafficking protein particle complex subunit 6B. (193 aa)
Armc5Armadillo repeat-containing protein 5. (926 aa)
CgPICR_008620Guanine nucleotide exchange factor MSS4-like protein. (107 aa)
I79_024396Syntaxin-2. (310 aa)
Plekhm2Pleckstrin-likey domain-containing family M member 2. (388 aa)
Zw10Centromere/kinetochore protein zw10-like. (779 aa)
I79_024878Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (110 aa)
Bet1lBET1-like protein. (192 aa)
I79_025127Protein prenyltransferase alpha subunit repeat-containing protein 1. (233 aa)
CgPICR_016864ADP-ribosylation factor-like protein 4D; Belongs to the small GTPase superfamily. Arf family. (201 aa)
I79_025800Golgi SNAP receptor complex member 2. (78 aa)
Gosr2Golgi SNAP receptor complex member 2. (156 aa)
I79_025997Vesicle-fusing ATPase. (51 aa)
I79_026015Surfeit locus protein 4. (78 aa)
I79_026064Vesicle-fusing ATPase. (67 aa)
I79_026104Vesicle-fusing ATPase. (93 aa)
I79_026115Vesicle-fusing ATPase. (50 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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