STRINGSTRING
Map1lc3b Map1lc3b Rubcn Rubcn I79_000977 I79_000977 Wipi2 Wipi2 Mief2 Mief2 I79_001738 I79_001738 Ulk2 Ulk2 Frmd4a Frmd4a Wdr45b Wdr45b Ambra1 Ambra1 I79_002869 I79_002869 Atg4c Atg4c Pik3r4 Pik3r4 I79_003250 I79_003250 I79_003382 I79_003382 Atg3 Atg3 Map1a Map1a I79_004214 I79_004214 I79_004366 I79_004366 Tecpr2 Tecpr2 Marchf5 Marchf5 Fkbp8 Fkbp8 Tbc1d15 Tbc1d15 Atg4b Atg4b Steap3 Steap3 Atg4d Atg4d I79_006018 I79_006018 Atg14 Atg14 I79_006552 I79_006552 Nrbf2 Nrbf2 Mul1 Mul1 Fis1 Fis1 Epg5 Epg5 I79_007394 I79_007394 Map1lc3a Map1lc3a I79_007692 I79_007692 Ulk1 Ulk1 Pgam5 Pgam5 I79_009941 I79_009941 Atg2b Atg2b Usp30 Usp30 Becn1 Becn1 Rnd2 Rnd2 Wdr45 Wdr45 Sqstm1 Sqstm1 Bcl2l13 Bcl2l13 Ilrun Ilrun I79_014258 I79_014258 Uvrag Uvrag Naif1 Naif1 I79_014915 I79_014915 I79_014954 I79_014954 Atg5 Atg5 Fundc1 Fundc1 Atg9a Atg9a Opa1 Opa1 Pik3c3 Pik3c3 I79_015695 I79_015695 Bnip3l Bnip3l Ddi1 Ddi1 I79_016240 I79_016240 Gsap Gsap Tmem208 Tmem208 Atg16l2 Atg16l2 I79_016561 I79_016561 Stk35 Stk35 Gabarapl1 Gabarapl1 Pdik1l Pdik1l I79_018303 I79_018303 Gabarapl2 Gabarapl2 I79_019091 I79_019091 Atg2a Atg2a Tbc1d17 Tbc1d17 I79_019318 I79_019318 Rb1cc1 Rb1cc1 I79_021191 I79_021191 Atg4a Atg4a Atg16l1 Atg16l1 I79_022295 I79_022295 Bnip3 Bnip3 Ptbp2 Ptbp2 Ulk3 Ulk3 Atg101 Atg101 I79_024270 I79_024270
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Map1lc3bMicrotubule-associated proteins 1A/1B light chain 3B. (125 aa)
RubcnUncharacterized protein KIAA0226. (877 aa)
I79_000977Metalloendopeptidase OMA1, mitochondrial. (238 aa)
Wipi2WD repeat domain phosphoinositide-interacting protein 2. (445 aa)
Mief2Smith-Magenis syndrome chromosome region candidate gene 7 protein-like. (341 aa)
I79_001738Serine/threonine-protein kinase ULK2. (112 aa)
Ulk2Serine/threonine-protein kinase ULK2. (830 aa)
Frmd4aFERM domain-containing protein 4A. (738 aa)
Wdr45bWD repeat domain phosphoinositide-interacting protein 3. (316 aa)
Ambra1Activating molecule in BECN1-regulated autophagy protein 1. (1300 aa)
I79_002869Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. (479 aa)
Atg4cCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (86 aa)
Pik3r4Phosphoinositide 3-kinase regulatory subunit 4. (993 aa)
I79_003250Phosphoinositide 3-kinase regulatory subunit 4. (194 aa)
I79_003382Beclin-1-like protein 1. (96 aa)
Atg3Autophagy-related protein 3. (314 aa)
Map1aMicrotubule-associated protein 1A. (2585 aa)
I79_004214FUN14 domain-containing protein 1. (136 aa)
I79_004366Gamma-aminobutyric acid receptor-associated protein. (148 aa)
Tecpr2WD repeat-containing protein KIAA0329/KIAA0297. (608 aa)
Marchf5E3 ubiquitin-protein ligase MARCH5. (99 aa)
Fkbp8Peptidylprolyl isomerase. (405 aa)
Tbc1d15TBC1 domain family member 15. (139 aa)
Atg4bCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (394 aa)
Steap3Metalloreductase STEAP3. (488 aa)
Atg4dCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (474 aa)
I79_006018Gamma-aminobutyric acid receptor-associated protein. (143 aa)
Atg14Uncharacterized protein KIAA0831. (375 aa)
I79_006552WD repeat domain phosphoinositide-interacting protein 1. (444 aa)
Nrbf2Nuclear receptor-binding factor 2. (243 aa)
Mul1Mitochondrial ubiquitin ligase activator of NFKB 1. (321 aa)
Fis1Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering. (152 aa)
Epg5UPF0493 protein KIAA1632. (522 aa)
I79_007394UPF0493 protein KIAA1632. (148 aa)
Map1lc3aMicrotubule-associated proteins 1A/1B light chain 3A. (278 aa)
I79_007692Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (618 aa)
Ulk1Serine/threonine-protein kinase ULK1. (999 aa)
Pgam5Phosphoglycerate mutase family member 5. (471 aa)
I79_009941Beclin-1-like protein 1. (131 aa)
Atg2bAutophagy-related protein 2-like B. (2076 aa)
Usp30Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (486 aa)
Becn1Beclin-1. (448 aa)
Rnd2Next to BRCA1 gene 1 protein. (864 aa)
Wdr45WD repeat domain phosphoinositide-interacting protein 4. (360 aa)
Sqstm1Sequestosome-1. (358 aa)
Bcl2l13Bcl-2-like protein 13. (433 aa)
IlrunUncharacterized protein C6orf106. (217 aa)
I79_014258Cysteine dioxygenase. (99 aa)
UvragUV radiation resistance-associated gene protein. (596 aa)
Naif1Nuclear apoptosis-inducing factor 1. (327 aa)
I79_014915Serine/threonine-protein kinase ULK3. (105 aa)
I79_014954Autophagy-related protein 7. (439 aa)
Atg5Autophagy protein 5; Involved in autophagic vesicle formation. (147 aa)
Fundc1FUN14 domain-containing protein 1. (133 aa)
Atg9aAutophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (839 aa)
Opa1Dynamin-like 120 kDa protein, mitochondrial; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (1015 aa)
Pik3c3Phosphatidylinositol 3-kinase catalytic subunit type 3. (822 aa)
I79_015695Microtubule-associated proteins 1A/1B light chain 3B. (257 aa)
Bnip3lBCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like. (179 aa)
Ddi1Protein DDI1-like 1. (331 aa)
I79_016240Beclin-1. (119 aa)
GsapProtein pigeon-like. (207 aa)
Tmem208Transmembrane protein 208. (173 aa)
Atg16l2Autophagy-related protein 16-2. (332 aa)
I79_016561Autophagy-related protein 16-2. (169 aa)
Stk35Serine/threonine-protein kinase 35. (88 aa)
Gabarapl1Gamma-aminobutyric acid receptor-associated protein-like 1. (117 aa)
Pdik1lSerine/threonine-protein kinase PDIK1L; Belongs to the protein kinase superfamily. (341 aa)
I79_018303WD repeat domain phosphoinositide-interacting protein 2. (96 aa)
Gabarapl2Gamma-aminobutyric acid receptor-associated protein-like 2. (117 aa)
I79_019091Autophagy-related protein 2-like A. (455 aa)
Atg2aAutophagy-related protein 2-like A. (945 aa)
Tbc1d17TBC1 domain family member 17. (673 aa)
I79_019318Microtubule-associated proteins 1A/1B light chain 3B. (71 aa)
Rb1cc1RB1-inducible coiled-coil protein 1. (1464 aa)
I79_021191Density-regulated protein. (54 aa)
Atg4aCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (398 aa)
Atg16l1Autophagy-related protein 16-1. (545 aa)
I79_022295Dynamin-1-like protein. (310 aa)
Bnip3BCL2/adenovirus E1B 19 kDa protein-interacting protein 3. (151 aa)
Ptbp2Polypyrimidine tract-binding protein 2. (212 aa)
Ulk3Serine/threonine-protein kinase ULK3; Belongs to the protein kinase superfamily. (216 aa)
Atg101Autophagy-related protein 101. (218 aa)
I79_024270Mitochondrial fission factor. (292 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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