5 items (Cricetulus griseus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Dbr1	Lariat debranching enzyme. (312 aa)
	I79_020218	Protein kinase C-binding protein NELL2. (452 aa)
	I79_020633	Protein kinase C-binding protein NELL1. (193 aa)
	Nell2	Protein kinase C-binding protein NELL2. (274 aa)
	I79_025362	Roundabout-like 3. (1038 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I79_020218	I79_025362	G3I9H1	G3IN50	Protein kinase C-binding protein NELL2.	Roundabout-like 3.	0.786
I79_020218	Nell2	G3I9H1	G3ICF7	Protein kinase C-binding protein NELL2.	Protein kinase C-binding protein NELL2.	0.921
I79_020633	I79_025362	G3IAK9	G3IN50	Protein kinase C-binding protein NELL1.	Roundabout-like 3.	0.786
I79_020633	Nell2	G3IAK9	G3ICF7	Protein kinase C-binding protein NELL1.	Protein kinase C-binding protein NELL2.	0.899
I79_025362	I79_020218	G3IN50	G3I9H1	Roundabout-like 3.	Protein kinase C-binding protein NELL2.	0.786
I79_025362	I79_020633	G3IN50	G3IAK9	Roundabout-like 3.	Protein kinase C-binding protein NELL1.	0.786
I79_025362	Nell2	G3IN50	G3ICF7	Roundabout-like 3.	Protein kinase C-binding protein NELL2.	0.786
Nell2	I79_020218	G3ICF7	G3I9H1	Protein kinase C-binding protein NELL2.	Protein kinase C-binding protein NELL2.	0.921
Nell2	I79_020633	G3ICF7	G3IAK9	Protein kinase C-binding protein NELL2.	Protein kinase C-binding protein NELL1.	0.899
Nell2	I79_025362	G3ICF7	G3IN50	Protein kinase C-binding protein NELL2.	Roundabout-like 3.	0.786