(30 nodes) Other glycan degradation, and Galactosidase activity network (Cricetulus griseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I79_001092	Beta-galactosidase. (680 aa)
	I79_001093	Beta-galactosidase. (659 aa)
	Man2b2	Alpha-mannosidase. (970 aa)
	Hexd	Hexosaminidase domain-containing protein. (486 aa)
	I79_003384	N-acylglucosamine 2-epimerase. (408 aa)
	Man2c1	Alpha-mannosidase 2C1. (1093 aa)
	Ganc	Neutral alpha-glucosidase C; Belongs to the glycosyl hydrolase 31 family. (675 aa)
	Glb1	Beta-galactosidase. (650 aa)
	Hexa	Beta-hexosaminidase. (528 aa)
	Gla	Alpha-galactosidase. (341 aa)
	Ctsa	Carboxypeptidase; Belongs to the peptidase S10 family. (475 aa)
	Man2b1	Alpha-mannosidase. (1009 aa)
	B3galnt1	Hexosyltransferase. (319 aa)
	Fuca1	Alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. (462 aa)
	Renbp	N-acylglucosamine 2-epimerase. (116 aa)
	Gaa	Lysosomal alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family. (949 aa)
	I79_015170	Beta-galactosidase. (615 aa)
	I79_015798	Beta-hexosaminidase subunit beta. (96 aa)
	I79_015800	Beta-hexosaminidase. (527 aa)
	A4galt	Lactosylceramide 4-alpha-galactosyltransferase. (348 aa)
	Neu1	Sialidase-1. (356 aa)
	Naga	Alpha-galactosidase. (415 aa)
	Gal3st1	Galactosylceramide sulfotransferase. (473 aa)
	Neu2	Sialidase-2. (379 aa)
	I79_020288	Cytosolic beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. (317 aa)
	Nagk	N-acetyl-D-glucosamine kinase. (299 aa)
	Gbgt1	Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1. (278 aa)
	I79_023917	Beta-mannosidase. (297 aa)
	I79_025216	Beta-hexosaminidase subunit beta. (74 aa)
	Neu3	Sialidase-3. (417 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A4galt	B3galnt1	G3HXT0	G3HHC0	Lactosylceramide 4-alpha-galactosyltransferase.	Hexosyltransferase.	0.985
A4galt	Gla	G3HXT0	G3H604	Lactosylceramide 4-alpha-galactosyltransferase.	Alpha-galactosidase.	0.928
A4galt	Glb1	G3HXT0	G3H2P3	Lactosylceramide 4-alpha-galactosyltransferase.	Beta-galactosidase.	0.800
A4galt	Hexa	G3HXT0	G3H3P8	Lactosylceramide 4-alpha-galactosyltransferase.	Beta-hexosaminidase.	0.904
A4galt	I79_015798	G3HXT0	G3HXN5	Lactosylceramide 4-alpha-galactosyltransferase.	Beta-hexosaminidase subunit beta.	0.901
A4galt	I79_015800	G3HXT0	G3HXN7	Lactosylceramide 4-alpha-galactosyltransferase.	Beta-hexosaminidase.	0.901
B3galnt1	A4galt	G3HHC0	G3HXT0	Hexosyltransferase.	Lactosylceramide 4-alpha-galactosyltransferase.	0.985
B3galnt1	Gbgt1	G3HHC0	G3IIN1	Hexosyltransferase.	Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1.	0.919
B3galnt1	Gla	G3HHC0	G3H604	Hexosyltransferase.	Alpha-galactosidase.	0.924
B3galnt1	Hexa	G3HHC0	G3H3P8	Hexosyltransferase.	Beta-hexosaminidase.	0.903
B3galnt1	I79_015798	G3HHC0	G3HXN5	Hexosyltransferase.	Beta-hexosaminidase subunit beta.	0.904
B3galnt1	I79_015800	G3HHC0	G3HXN7	Hexosyltransferase.	Beta-hexosaminidase.	0.904
B3galnt1	Naga	G3HHC0	G3I0F7	Hexosyltransferase.	Alpha-galactosidase.	0.926
Ctsa	Glb1	G3H8V5	G3H2P3	Carboxypeptidase; Belongs to the peptidase S10 family.	Beta-galactosidase.	0.981
Ctsa	I79_001092	G3H8V5	G3GTV3	Carboxypeptidase; Belongs to the peptidase S10 family.	Beta-galactosidase.	0.560
Ctsa	I79_001093	G3H8V5	G3GTV4	Carboxypeptidase; Belongs to the peptidase S10 family.	Beta-galactosidase.	0.538
Ctsa	I79_015170	G3H8V5	G3HW22	Carboxypeptidase; Belongs to the peptidase S10 family.	Beta-galactosidase.	0.560
Ctsa	Man2b1	G3H8V5	G3HCV4	Carboxypeptidase; Belongs to the peptidase S10 family.	Alpha-mannosidase.	0.529
Ctsa	Man2c1	G3H8V5	G3H0F1	Carboxypeptidase; Belongs to the peptidase S10 family.	Alpha-mannosidase 2C1.	0.412
Ctsa	Neu1	G3H8V5	G3HZE3	Carboxypeptidase; Belongs to the peptidase S10 family.	Sialidase-1.	0.830