(21 nodes) Mixed, incl. Rege-1, UBA-like domain, and La-type HTH domain network (Cricetulus griseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Larp4b	La-related protein 4B. (615 aa)
	Efcab14	EF-hand domain-containing protein KIAA0494. (449 aa)
	Serpinc1	Roquin; Belongs to the serpin family. (1418 aa)
	Zc3h12d	Putative ribonuclease ZC3H12D. (549 aa)
	CgPICR_009178	Apoptosis inhibitor 5. (66 aa)
	Tp53inp2	Tumor protein p53-inducible nuclear protein 2. (222 aa)
	Helz	Putative helicase with zinc finger domain. (1955 aa)
	Zc3h12a	Ribonuclease ZC3H12A. (577 aa)
	I79_010042	RNA-binding protein 27. (789 aa)
	Tp53inp1	Tumor protein p53-inducible nuclear protein 1. (239 aa)
	Aven	Cell death regulator Aven. (268 aa)
	I79_010640	La-related protein 4. (510 aa)
	I79_011558	Ring finger and CCCH-type zinc finger domain-containing protein 2. (835 aa)
	Rnase13	Ribonuclease-like protein 13; Belongs to the pancreatic ribonuclease family. (153 aa)
	Larp4	La-related protein 4. (188 aa)
	Paip2b	Polyadenylate-binding protein-interacting protein 2B. (138 aa)
	Zc3h12b	Putative ribonuclease ZC3H12B. (823 aa)
	Api5	Apoptosis inhibitor 5. (513 aa)
	Tspyl2	Testis-specific Y-encoded-like protein 2; Belongs to the nucleosome assembly protein (NAP) family. (622 aa)
	I79_024210	Nuclear protein 1. (103 aa)
	I79_025122	Cytochrome P450 2B1. (68 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Api5	Aven	G3IH34	G3HIH2	Apoptosis inhibitor 5.	Cell death regulator Aven.	0.546
Api5	Tp53inp1	G3IH34	G3HI20	Apoptosis inhibitor 5.	Tumor protein p53-inducible nuclear protein 1.	0.445
Api5	Tp53inp2	G3IH34	G3HAP3	Apoptosis inhibitor 5.	Tumor protein p53-inducible nuclear protein 2.	0.460
Api5	Tspyl2	G3IH34	G3IJL1	Apoptosis inhibitor 5.	Testis-specific Y-encoded-like protein 2; Belongs to the nucleosome assembly protein (NAP) family.	0.591
Aven	Api5	G3HIH2	G3IH34	Cell death regulator Aven.	Apoptosis inhibitor 5.	0.546
Aven	CgPICR_009178	G3HIH2	G3HA65	Cell death regulator Aven.	Apoptosis inhibitor 5.	0.546
CgPICR_009178	Aven	G3HA65	G3HIH2	Apoptosis inhibitor 5.	Cell death regulator Aven.	0.546
CgPICR_009178	Tp53inp1	G3HA65	G3HI20	Apoptosis inhibitor 5.	Tumor protein p53-inducible nuclear protein 1.	0.445
CgPICR_009178	Tp53inp2	G3HA65	G3HAP3	Apoptosis inhibitor 5.	Tumor protein p53-inducible nuclear protein 2.	0.460
CgPICR_009178	Tspyl2	G3HA65	G3IJL1	Apoptosis inhibitor 5.	Testis-specific Y-encoded-like protein 2; Belongs to the nucleosome assembly protein (NAP) family.	0.591
Helz	I79_011558	G3HCS2	G3HLG9	Putative helicase with zinc finger domain.	Ring finger and CCCH-type zinc finger domain-containing protein 2.	0.661
Helz	Serpinc1	G3HCS2	G3GZL3	Putative helicase with zinc finger domain.	Roquin; Belongs to the serpin family.	0.404
I79_010042	I79_011558	G3HHE2	G3HLG9	RNA-binding protein 27.	Ring finger and CCCH-type zinc finger domain-containing protein 2.	0.443
I79_011558	Helz	G3HLG9	G3HCS2	Ring finger and CCCH-type zinc finger domain-containing protein 2.	Putative helicase with zinc finger domain.	0.661
I79_011558	I79_010042	G3HLG9	G3HHE2	Ring finger and CCCH-type zinc finger domain-containing protein 2.	RNA-binding protein 27.	0.443
I79_011558	Serpinc1	G3HLG9	G3GZL3	Ring finger and CCCH-type zinc finger domain-containing protein 2.	Roquin; Belongs to the serpin family.	0.567
I79_024210	Tp53inp1	G3IK17	G3HI20	Nuclear protein 1.	Tumor protein p53-inducible nuclear protein 1.	0.757
Larp4b	Zc3h12b	G3GR95	G3IGU4	La-related protein 4B.	Putative ribonuclease ZC3H12B.	0.410
Serpinc1	Helz	G3GZL3	G3HCS2	Roquin; Belongs to the serpin family.	Putative helicase with zinc finger domain.	0.404
Serpinc1	I79_011558	G3GZL3	G3HLG9	Roquin; Belongs to the serpin family.	Ring finger and CCCH-type zinc finger domain-containing protein 2.	0.567