STRINGSTRING
Snrnp200 Snrnp200 Prpf3 Prpf3 Prpf4 Prpf4 Eftud2 Eftud2 Sart1 Sart1 Prpf31 Prpf31 Ddx23 Ddx23
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Snrnp200U5 small nuclear ribonucleoprotein 200 kDa helicase. (1377 aa)
Prpf3U4/U6 small nuclear ribonucleoprotein Prp3. (683 aa)
Prpf4U4/U6 small nuclear ribonucleoprotein Prp4. (521 aa)
Eftud2116 kDa U5 small nuclear ribonucleoprotein component. (972 aa)
Sart1U4/U6.U5 tri-snRNP-associated protein 1. (1215 aa)
Prpf31U4/U6 small nuclear ribonucleoprotein Prp31. (441 aa)
Ddx23Putative ATP-dependent RNA helicase DDX23. (819 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.