(19 nodes) Mixed, incl. HAUS complex, and Ajuba-like network (Cricetulus griseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I79_000445	Fermitin family-like 1. (641 aa)
	Lpp	Lipoma-preferred partner. (355 aa)
	Thyn1	Thymocyte nuclear protein 1. (226 aa)
	Plekhg1	Pleckstrin-likey domain-containing family G member 1. (1416 aa)
	I79_003791	HAUS augmin-like complex subunit 2. (203 aa)
	Haus8	HAUS augmin-like complex subunit 8. (351 aa)
	I79_012243	LIM domain only protein 7. (1341 aa)
	I79_012803	HAUS augmin-like complex subunit 5. (711 aa)
	Haus4	HAUS augmin-like complex subunit 4. (388 aa)
	Ajuba	Protein ajuba. (214 aa)
	Haus7	HAUS augmin-like complex subunit 7. (284 aa)
	I79_014422	Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein. (90 aa)
	Wtip	Wilms tumor protein 1-interacting protein. (133 aa)
	Limd1	LIM domain-containing protein 1. (667 aa)
	Haus3	HAUS augmin-like complex subunit 3. (602 aa)
	I79_019780	GAS2-like protein 2. (760 aa)
	I79_020299	LIM and calponin-likey domains-containing protein 1. (1395 aa)
	Shisa3	Protein shisa-3-like. (170 aa)
	Fhl5	Four and a half LIM domains protein 5. (117 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ajuba	Haus3	G3HRD7	G3I0K1	Protein ajuba.	HAUS augmin-like complex subunit 3.	0.705
Ajuba	Haus7	G3HRD7	G3HSX9	Protein ajuba.	HAUS augmin-like complex subunit 7.	0.534
Ajuba	Haus8	G3HRD7	G3H4F6	Protein ajuba.	HAUS augmin-like complex subunit 8.	0.683
Ajuba	I79_000445	G3HRD7	G3GSC4	Protein ajuba.	Fermitin family-like 1.	0.432
Ajuba	I79_012803	G3HRD7	G3HPT2	Protein ajuba.	HAUS augmin-like complex subunit 5.	0.690
Ajuba	I79_014422	G3HRD7	G3HU03	Protein ajuba.	Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein.	0.525
Ajuba	Limd1	G3HRD7	G3HWS7	Protein ajuba.	LIM domain-containing protein 1.	0.946
Ajuba	Wtip	G3HRD7	G3HUM4	Protein ajuba.	Wilms tumor protein 1-interacting protein.	0.946
Haus3	Ajuba	G3I0K1	G3HRD7	HAUS augmin-like complex subunit 3.	Protein ajuba.	0.705
Haus3	Haus4	G3I0K1	G3HRD5	HAUS augmin-like complex subunit 3.	HAUS augmin-like complex subunit 4.	0.986
Haus3	Haus7	G3I0K1	G3HSX9	HAUS augmin-like complex subunit 3.	HAUS augmin-like complex subunit 7.	0.977
Haus3	Haus8	G3I0K1	G3H4F6	HAUS augmin-like complex subunit 3.	HAUS augmin-like complex subunit 8.	0.986
Haus3	I79_003791	G3I0K1	G3H0X1	HAUS augmin-like complex subunit 3.	HAUS augmin-like complex subunit 2.	0.834
Haus3	I79_012803	G3I0K1	G3HPT2	HAUS augmin-like complex subunit 3.	HAUS augmin-like complex subunit 5.	0.983
Haus3	Limd1	G3I0K1	G3HWS7	HAUS augmin-like complex subunit 3.	LIM domain-containing protein 1.	0.705
Haus3	Lpp	G3I0K1	G3GT88	HAUS augmin-like complex subunit 3.	Lipoma-preferred partner.	0.705
Haus3	Wtip	G3I0K1	G3HUM4	HAUS augmin-like complex subunit 3.	Wilms tumor protein 1-interacting protein.	0.705
Haus4	Haus3	G3HRD5	G3I0K1	HAUS augmin-like complex subunit 4.	HAUS augmin-like complex subunit 3.	0.986
Haus4	Haus7	G3HRD5	G3HSX9	HAUS augmin-like complex subunit 4.	HAUS augmin-like complex subunit 7.	0.975
Haus4	Haus8	G3HRD5	G3H4F6	HAUS augmin-like complex subunit 4.	HAUS augmin-like complex subunit 8.	0.985