STRINGSTRING
Leo1 Leo1 Tceanc2 Tceanc2 I79_001397 I79_001397 Polr3d Polr3d Cdk13 Cdk13 Polr1d Polr1d Nelfcd Nelfcd I79_002286 I79_002286 Gtf3c2 Gtf3c2 I79_002587 I79_002587 Polr2a Polr2a I79_002824 I79_002824 Ccnt2 Ccnt2 Polr1b Polr1b I79_003761 I79_003761 Rtf1 Rtf1 Brf2 Brf2 I79_004330 I79_004330 Polr3c Polr3c Polr3gl Polr3gl Cinp Cinp H671_5g13732 H671_5g13732 Ell Ell I79_005718 I79_005718 Elof1 Elof1 Ell2 Ell2 CgPICR_007098 CgPICR_007098 Eaf2 Eaf2 I79_008212 I79_008212 Ctdp1 Ctdp1 Polr2e Polr2e Rrn3 Rrn3 I79_009809 I79_009809 I79_010000 I79_010000 I79_010560 I79_010560 Ccnk Ccnk I79_010679 I79_010679 Supt4h1 Supt4h1 Paf1 Paf1 Supt5h Supt5h I79_010857 I79_010857 I79_011089 I79_011089 Nelfa Nelfa Iws1 Iws1 Polr3g Polr3g Polr1e Polr1e Gtf3c6 Gtf3c6 I79_012064 I79_012064 I79_012419 I79_012419 Polr3b Polr3b I79_012655 I79_012655 CUNH6orf15 CUNH6orf15 Ssrp1 Ssrp1 I79_013985 I79_013985 Eepd1 Eepd1 Polr2k Polr2k I79_014650 I79_014650 Cdc73 Cdc73 Cdk9 Cdk9 Polr1h Polr1h Maf1 Maf1 Supt16h Supt16h Ctr9 Ctr9 Polr1c Polr1c Nelfe Nelfe Polr2h Polr2h Polr2l Polr2l Polr2c Polr2c I79_018037 I79_018037 Gtf3c1 Gtf3c1 Polr2f Polr2f CgPICR_017319 CgPICR_017319 Polr2d Polr2d H671_xg20150 H671_xg20150 Polr2b Polr2b Polr1a Polr1a Sidt2 Sidt2 CgPICR_018060 CgPICR_018060 Tcea2 Tcea2 CgPICR_018980 CgPICR_018980 I79_021831 I79_021831 Crcp Crcp Gtf3c4 Gtf3c4 Nelfb Nelfb Supt6h Supt6h I79_023118 I79_023118 Polr3e Polr3e I79_023511 I79_023511 Aff1 Aff1 Gtf3c5 Gtf3c5 Polr1f Polr1f I79_024075 I79_024075 I79_024076 I79_024076 I79_024085 I79_024085 I79_024103 I79_024103 I79_024503 I79_024503 Gtf3c3 Gtf3c3 Ccnt1 Ccnt1 I79_025111 I79_025111 I79_025135 I79_025135 I79_025479 I79_025479 I79_025615 I79_025615 I79_025758 I79_025758
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Leo1RNA polymerase-associated protein LEO1. (760 aa)
Tceanc2Uncharacterized protein C1orf83-like. (208 aa)
I79_001397Lysophosphatidic acid receptor 5. (210 aa)
Polr3dDNA-directed RNA polymerase III subunit RPC4. (398 aa)
Cdk13Cell division cycle 2-like protein kinase 5. (405 aa)
Polr1dDNA-directed RNA polymerases I and III subunit RPAC2-like protein. (116 aa)
NelfcdNegative elongation factor D. (580 aa)
I79_002286LWamide neuropeptides. (841 aa)
Gtf3c2General transcription factor 3C polypeptide 2. (959 aa)
I79_002587Protein AF-9. (347 aa)
Polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (617 aa)
I79_002824DNA-directed RNA polymerase II subunit RPB7. (69 aa)
Ccnt2Cyclin-T2; Belongs to the cyclin family. (724 aa)
Polr1bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (996 aa)
I79_003761RNA polymerase II elongation factor ELL3. (299 aa)
Rtf1RNA polymerase-associated protein RTF1-like. (585 aa)
Brf2Transcription factor IIIB 50 kDa subunit. (416 aa)
I79_004330AF4/FMR2 family member 4. (1091 aa)
Polr3cRNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (533 aa)
Polr3glDNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (266 aa)
CinpCyclin-dependent kinase 2-interacting protein. (212 aa)
H671_5g13732Transcription factor TFIIB containing protein. (416 aa)
EllRNA polymerase II elongation factor ELL. (545 aa)
I79_005718Cell division cycle 2-related protein kinase 7. (1379 aa)
Elof1Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (83 aa)
Ell2RNA polymerase II elongation factor ELL2. (507 aa)
CgPICR_007098DNA-directed RNA polymerases I, II, and III subunit RPABC5. (84 aa)
Eaf2ELL-associated factor 2. (81 aa)
I79_008212Protein ENL. (434 aa)
Ctdp1RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (848 aa)
Polr2eDNA-directed RNA polymerases I, II, and III subunit RPABC1. (218 aa)
Rrn3RNA polymerase I-specific transcription initiation factor RRN3. (224 aa)
I79_009809Uncharacterized protein. (136 aa)
I79_010000DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1076 aa)
I79_010560Transcription factor TFIIIB component B''-like. (2228 aa)
CcnkCyclin-K; Belongs to the cyclin family. (492 aa)
I79_010679DNA-directed RNA polymerases I, II, and III subunit RPABC1. (112 aa)
Supt4h1Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
Paf1RNA polymerase II-associated factor 1-like. (537 aa)
Supt5hTranscription elongation factor SPT5. (944 aa)
I79_010857DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (638 aa)
I79_011089Negative elongation factor A. (128 aa)
NelfaNegative elongation factor A. (460 aa)
Iws1Protein IWS1-like. (807 aa)
Polr3gDNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (227 aa)
Polr1eDNA-directed RNA polymerase I subunit RPA49. (434 aa)
Gtf3c6General transcription factor 3C polypeptide 6. (224 aa)
I79_012064Transcription elongation factor A protein 3. (138 aa)
I79_012419Zinc finger protein 512. (319 aa)
Polr3bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1133 aa)
I79_012655DNA-directed RNA polymerase I subunit RPA34. (332 aa)
CUNH6orf15Uncharacterized protein C6orf15-like. (364 aa)
Ssrp1FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (709 aa)
I79_013985Transcription elongation factor A protein 1. (278 aa)
Eepd1Endonuclease/exonuclease/phosphatase family domain-containing protein 1. (569 aa)
Polr2kDNA-directed RNA polymerases I, II, and III subunit RPABC4. (58 aa)
I79_014650Parafibromin. (260 aa)
Cdc73Parafibromin. (164 aa)
Cdk9Cell division protein kinase 9; Belongs to the protein kinase superfamily. (372 aa)
Polr1hDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (123 aa)
Maf1Repressor of RNA polymerase III transcription MAF1; Element of the TORC1 signaling pathway that acts as a mediator of diverse signals and that represses RNA polymerase III transcription. Inhibits the de novo assembly of TFIIIB onto DNA. Belongs to the MAF1 family. (258 aa)
Supt16hFACT complex subunit SPT16. (927 aa)
Ctr9RNA polymerase-associated protein CTR9-like. (1171 aa)
Polr1cDNA-directed RNA polymerases I and III subunit RPAC1. (282 aa)
NelfeNegative elongation factor E. (67 aa)
Polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
Polr2lDNA-directed RNA polymerases I, II, and III subunit RPABC5. (109 aa)
Polr2cDNA-directed RNA polymerase II subunit RPB3. (275 aa)
I79_018037RNA polymerase I-specific transcription initiation factor RRN3. (202 aa)
Gtf3c1General transcription factor 3C polypeptide 1. (2005 aa)
Polr2fDNA-directed RNA polymerases I, II, and III subunit RPABC2. (121 aa)
CgPICR_017319DNA-directed RNA polymerases I, II, and III subunit RPABC5. (77 aa)
Polr2dDNA-directed RNA polymerase II subunit RPB4. (104 aa)
H671_xg20150Uncharacterized protein. (422 aa)
Polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (807 aa)
Polr1aDNA-directed RNA polymerase I subunit RPA1. (980 aa)
Sidt2SID1 transmembrane family member 2. (535 aa)
CgPICR_018060DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (108 aa)
Tcea2Transcription elongation factor A protein 2. (255 aa)
CgPICR_018980Cyclin-K; Belongs to the cyclin family. (573 aa)
I79_021831RNA polymerase II transcription factor SIII subunit A3-like-2. (470 aa)
CrcpDNA-directed RNA polymerase III subunit RPC9-like protein. (215 aa)
Gtf3c4General transcription factor 3C polypeptide 4. (817 aa)
NelfbNegative elongation factor B. (580 aa)
Supt6hTranscription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1725 aa)
I79_023118TATA box-binding protein-like protein 2. (147 aa)
Polr3eDNA-directed RNA polymerase III subunit RPC5. (611 aa)
I79_023511DNA-directed RNA polymerase III subunit RPC8. (175 aa)
Aff1AF4/FMR2 family member 1. (866 aa)
Gtf3c5General transcription factor 3C polypeptide 5. (518 aa)
Polr1fDNA-directed RNA polymerase I subunit RPA43. (169 aa)
I79_024075RNA polymerase II transcription factor SIII subunit A3-like-2. (486 aa)
I79_024076RNA polymerase II transcription factor SIII subunit A3-like-2. (111 aa)
I79_024085Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (83 aa)
I79_024103RNA polymerase II transcription factor SIII subunit A2. (393 aa)
I79_024503AF4/FMR2 family member 1. (470 aa)
Gtf3c3General transcription factor 3C polypeptide 3. (883 aa)
Ccnt1Cyclin-T1; Belongs to the cyclin family. (729 aa)
I79_025111Uncharacterized protein. (115 aa)
I79_025135Transcription elongation factor spt5. (136 aa)
I79_025479Uncharacterized protein. (273 aa)
I79_025615RNA polymerase II transcription factor SIII subunit A2. (376 aa)
I79_025758RNA polymerase II transcription factor SIII subunit A3-like-1. (402 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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