STRINGSTRING
Gtf2a2 Gtf2a2 I79_005652 I79_005652 Gtf2e2 Gtf2e2 Gtf2f2 Gtf2f2 Gtf2e1 Gtf2e1 Gtf2f1 Gtf2f1 Gtf2h5 Gtf2h5 Map3k2 Map3k2 Tbp Tbp I79_012652 I79_012652 Ccnh Ccnh Gtf2h4 Gtf2h4 I79_013580 I79_013580 Cdk7 Cdk7 Gtf2h3 Gtf2h3 Gtf2h1 Gtf2h1 Gtf2b Gtf2b Tbpl1 Tbpl1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Gtf2a2Transcription initiation factor IIA subunit 2. (63 aa)
I79_005652TFIIA-alpha and beta-like factor. (387 aa)
Gtf2e2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (291 aa)
Gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
Gtf2e1General transcription factor IIE subunit 1. (438 aa)
Gtf2f1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (508 aa)
Gtf2h5General transcription factor IIH subunit 5. (71 aa)
Map3k2TFIIH basal transcription factor complex helicase XPB subunit. (1183 aa)
TbpTATA-box-binding protein. (315 aa)
I79_012652TFIIH basal transcription factor complex helicase subunit. (108 aa)
CcnhCyclin-H; Belongs to the cyclin family. (323 aa)
Gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (463 aa)
I79_013580General transcription factor IIH subunit. (395 aa)
Cdk7Cell division protein kinase 7; Belongs to the protein kinase superfamily. (346 aa)
Gtf2h3General transcription factor IIH subunit 3. (313 aa)
Gtf2h1General transcription factor IIH subunit 1. (547 aa)
Gtf2bTranscription initiation factor IIB. (285 aa)
Tbpl1TATA box-binding protein-like protein 1. (186 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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