(11 nodes) Microfibril network (Cricetulus griseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I79_009240	ADAMTS-like protein 5. (669 aa)
	I79_013535	Fibrillin-3. (1889 aa)
	I79_013556	Fibrillin-1. (2698 aa)
	Efemp2	EGF-containing fibulin-like extracellular matrix protein 2. (375 aa)
	I79_017864	Fibrillin-2. (2601 aa)
	Adamts10	A disintegrin and metalloproteinase with thrombospondin motifs 10. (1161 aa)
	Mfap2	Microfibrillar-associated protein 2. (187 aa)
	I79_009100	Latent-transforming growth factor beta-binding protein 1. (1194 aa)
	I79_004888	Thrombospondin type-1 domain-containing protein 4. (284 aa)
	Thsd4	Thrombospondin type-1 domain-containing protein 4. (651 aa)
	Mfap1	Microfibrillar-associated protein 1. (439 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Adamts10	I79_009100	G3I5Q1	G3HEV3	A disintegrin and metalloproteinase with thrombospondin motifs 10.	Latent-transforming growth factor beta-binding protein 1.	0.587
Adamts10	I79_013556	G3I5Q1	G3HRT4	A disintegrin and metalloproteinase with thrombospondin motifs 10.	Fibrillin-1.	0.849
Efemp2	I79_009100	G3I2G7	G3HEV3	EGF-containing fibulin-like extracellular matrix protein 2.	Latent-transforming growth factor beta-binding protein 1.	0.401
Efemp2	I79_013556	G3I2G7	G3HRT4	EGF-containing fibulin-like extracellular matrix protein 2.	Fibrillin-1.	0.506
Efemp2	Mfap2	G3I2G7	G3IEX7	EGF-containing fibulin-like extracellular matrix protein 2.	Microfibrillar-associated protein 2.	0.576
I79_004888	Thsd4	G3H3Q9	G3H3Q8	Thrombospondin type-1 domain-containing protein 4.	Thrombospondin type-1 domain-containing protein 4.	0.730
I79_009100	Adamts10	G3HEV3	G3I5Q1	Latent-transforming growth factor beta-binding protein 1.	A disintegrin and metalloproteinase with thrombospondin motifs 10.	0.587
I79_009100	Efemp2	G3HEV3	G3I2G7	Latent-transforming growth factor beta-binding protein 1.	EGF-containing fibulin-like extracellular matrix protein 2.	0.401
I79_009100	I79_013556	G3HEV3	G3HRT4	Latent-transforming growth factor beta-binding protein 1.	Fibrillin-1.	0.699
I79_009240	I79_013556	G3HF84	G3HRT4	ADAMTS-like protein 5.	Fibrillin-1.	0.551
I79_013535	I79_013556	G3HRR4	G3HRT4	Fibrillin-3.	Fibrillin-1.	0.650
I79_013535	Mfap2	G3HRR4	G3IEX7	Fibrillin-3.	Microfibrillar-associated protein 2.	0.645
I79_013556	Adamts10	G3HRT4	G3I5Q1	Fibrillin-1.	A disintegrin and metalloproteinase with thrombospondin motifs 10.	0.849
I79_013556	Efemp2	G3HRT4	G3I2G7	Fibrillin-1.	EGF-containing fibulin-like extracellular matrix protein 2.	0.506
I79_013556	I79_009100	G3HRT4	G3HEV3	Fibrillin-1.	Latent-transforming growth factor beta-binding protein 1.	0.699
I79_013556	I79_009240	G3HRT4	G3HF84	Fibrillin-1.	ADAMTS-like protein 5.	0.551
I79_013556	I79_013535	G3HRT4	G3HRR4	Fibrillin-1.	Fibrillin-3.	0.650
I79_013556	I79_017864	G3HRT4	G3I363	Fibrillin-1.	Fibrillin-2.	0.650
I79_013556	Mfap1	G3HRT4	G3H0T7	Fibrillin-1.	Microfibrillar-associated protein 1.	0.571
I79_013556	Mfap2	G3HRT4	G3IEX7	Fibrillin-1.	Microfibrillar-associated protein 2.	0.853