STRINGSTRING
Rab11fip2 Rab11fip2 Bin2 Bin2 I79_022945 I79_022945 I79_022271 I79_022271 I79_020044 I79_020044 Anxa1 Anxa1 Sh3bp1 Sh3bp1 I79_018349 I79_018349 Tlr4 Tlr4 Tnf Tnf Aif1 Aif1 Rab31 Rab31 Ticam2 Ticam2 Pip5k1c Pip5k1c I79_011017 I79_011017 Rack1 Rack1 Arhgap25 Arhgap25 Syt11 Syt11 I79_009584 I79_009584 Abca7 Abca7 Trip10 Trip10 Lcp1 Lcp1 I79_005867 I79_005867 I79_005444 I79_005444 I79_004875 I79_004875 I79_003941 I79_003941 Snx5 Snx5 Rac1 Rac1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Rab11fip2Rab11 family-interacting protein 2. (452 aa)
Bin2Bridging integrator 2. (505 aa)
I79_022945Immunity-related GTPase family M protein. (285 aa)
I79_022271Ras-related C3 botulinum toxin substrate 2. (178 aa)
I79_020044Brain-specific angiogenesis inhibitor 1; Belongs to the G-protein coupled receptor 2 family. (1537 aa)
Anxa1Annexin. (346 aa)
Sh3bp1SH3 domain-binding protein 1. (619 aa)
I79_018349Coronin-1A. (143 aa)
Tlr4Toll-like receptor 4; Belongs to the Toll-like receptor family. (838 aa)
TnfTumor necrosis factor; Belongs to the tumor necrosis factor family. (234 aa)
Aif1Allograft inflammatory factor 1. (80 aa)
Rab31Ras-related protein Rab-31. (122 aa)
Ticam2TIR domain-containing adapter molecule 2. (233 aa)
Pip5k1cPhosphatidylinositol-4-phosphate 5-kinase type-1 gamma. (532 aa)
I79_011017Immunity-related GTPase family M protein. (341 aa)
Rack1Guanine nucleotide-binding protein subunit beta-2-like 1. (276 aa)
Arhgap25Rho GTPase-activating protein 25. (617 aa)
Syt11Synaptotagmin-11. (111 aa)
I79_009584Platelet endothelial aggregation receptor 1. (821 aa)
Abca7ATP-binding cassette sub-family A member 7. (408 aa)
Trip10Cdc42-interacting protein 4. (610 aa)
Lcp1Plastin-2. (872 aa)
I79_005867Dynamin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (885 aa)
I79_005444CDC42 small effector protein 2-A. (127 aa)
I79_004875Rho GTPase-activating protein 12. (791 aa)
I79_003941Multiple epidermal growth factor-like domains 10. (800 aa)
Snx5Sorting nexin-5. (289 aa)
Rac1Ras-related C3 botulinum toxin substrate 1. (148 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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