STRINGSTRING
Acvrl1 Acvrl1 Rbpj Rbpj Dll4 Dll4 Epas1 Epas1 I79_022685 I79_022685 Rspo3 Rspo3 Mef2c Mef2c Ext1 Ext1 Ednra Ednra Igf1 Igf1 Bmpr2 Bmpr2 Lyrm9 Lyrm9 Jag1 Jag1 I79_000092 I79_000092 Dbh Dbh I79_007693 I79_007693 Hoxa3 Hoxa3 I79_008633 I79_008633 Tgfbr3 Tgfbr3 I79_009030 I79_009030 Nfatc3 Nfatc3 Cbs Cbs Crb1 Crb1 I79_011762 I79_011762 I79_011943 I79_011943 Sema3c Sema3c Atp7a Atp7a I79_012814 I79_012814 I79_012815 I79_012815 Chd7 Chd7 Acvr2b Acvr2b Bak1 Bak1 Ahr Ahr Atg5 Atg5 CgPICR_014700 CgPICR_014700 Npm3 Npm3 Lif Lif I79_019149 I79_019149 Hnrnpul1 Hnrnpul1 Flna Flna
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Acvrl1Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (776 aa)
RbpjRecombining binding protein suppressor of hairless-like protein. (486 aa)
Dll4Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (578 aa)
Epas1Endothelial PAS domain-containing protein 1. (878 aa)
I79_022685Dopamine beta-hydroxylase. (534 aa)
Rspo3R-spondin-3. (81 aa)
Mef2cMyocyte-specific enhancer factor 2C. (465 aa)
Ext1Exostosin-1. (388 aa)
EdnraEndothelin-1 receptor; Belongs to the G-protein coupled receptor 1 family. (412 aa)
Igf1Insulin-like growth factor I. (75 aa)
Bmpr2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1038 aa)
Lyrm9Nitric oxide synthase; Produces nitric oxide (NO); Belongs to the complex I LYR family. (1115 aa)
Jag1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1186 aa)
I79_000092Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
DbhDopamine beta-hydroxylase. (117 aa)
I79_007693Nitric oxide synthase; Produces nitric oxide (NO). (1129 aa)
Hoxa3Homeobox protein Hox-A3. (286 aa)
I79_008633Integrin alpha-4; Belongs to the integrin alpha chain family. (441 aa)
Tgfbr3TGF-beta receptor type III. (849 aa)
I79_009030T-box transcription factor TBX1. (293 aa)
Nfatc3Nuclear factor of activated T-cells, cytoplasmic 3. (1075 aa)
CbsCystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (561 aa)
Crb1Crumbs-like 1. (989 aa)
I79_011762Crumbs-like 1. (107 aa)
I79_011943Semaphorin-3C. (86 aa)
Sema3cSemaphorin-3C; Belongs to the semaphorin family. (493 aa)
Atp7aCopper-transporting ATPase 1. (1457 aa)
I79_012814Chromodomain-helicase-DNA-binding protein 7. (100 aa)
I79_012815Chromodomain-helicase-DNA-binding protein 7. (150 aa)
Chd7Chromodomain-helicase-DNA-binding protein 7. (615 aa)
Acvr2bSerine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (559 aa)
Bak1Bcl-2-likeous antagonist/killer. (209 aa)
AhrAryl hydrocarbon receptor. (247 aa)
Atg5Autophagy protein 5; Involved in autophagic vesicle formation. (147 aa)
CgPICR_014700C-C chemokine receptor type 2; Belongs to the G-protein coupled receptor 1 family. (373 aa)
Npm3Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (337 aa)
LifLeukemia inhibitory factor-like protein. (158 aa)
I79_019149Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (132 aa)
Hnrnpul1Heterogeneous nuclear ribonucleoprotein U-like protein 1. (1566 aa)
FlnaFilamin-A. (2488 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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