STRINGSTRING
I79_025388 I79_025388 I79_025342 I79_025342 Kit Kit I79_025176 I79_025176 Pdgfra Pdgfra Otogl Otogl Sbds Sbds Mmp21 Mmp21 I79_022935 I79_022935 I79_022741 I79_022741 I79_022740 I79_022740 I79_022034 I79_022034 Tet2 Tet2 Kcnab2 Kcnab2 I79_021067 I79_021067 Tmem143 Tmem143 Tgfb1 Tgfb1 Slc37a4 Slc37a4 I79_020109 I79_020109 Rest Rest Rrs1 Rrs1 Heatr9 Heatr9 Lmbr1l Lmbr1l I79_018801 I79_018801 Top2a Top2a Mlf1 Mlf1 I79_018561 I79_018561 Rbm47 Rbm47 Apobec3b Apobec3b Cebpd Cebpd I79_017613 I79_017613 I79_017561 I79_017561 Lyn Lyn Arhgef7 Arhgef7 Sirpa Sirpa I79_017066 I79_017066 Anln Anln Tent2 Tent2 I79_016598 I79_016598 I79_016386 I79_016386 Srf Srf Inhba Inhba Psen2 Psen2 I79_014847 I79_014847 Sp7 Sp7 I79_014810 I79_014810 Eef2 Eef2 I79_013659 I79_013659 I79_012731 I79_012731 I79_012652 I79_012652 Ercc2 Ercc2 I79_012556 I79_012556 Runx1 Runx1 I79_012384 I79_012384 I79_012327 I79_012327 Tal1 Tal1 I79_002587 I79_002587 I79_002467 I79_002467 Samd9l Samd9l Samd9 Samd9 Cdk6 Cdk6 Narf Narf I79_002104 I79_002104 I79_002099 I79_002099 I79_001790 I79_001790 Gata3 Gata3 Ptpn6 Ptpn6 Sp3 Sp3 Jam3 Jam3 Lig4 Lig4 I79_001001 I79_001001 Chd2 Chd2 Pygo1 Pygo1 Psen1 Psen1 I79_012036 I79_012036 Herc6 Herc6 Ptprz1 Ptprz1 Dnai4 Dnai4 I79_011427 I79_011427 I79_011337 I79_011337 Slc7a6os Slc7a6os I79_011333 I79_011333 Trex1 Trex1 I79_011207 I79_011207 I79_011138 I79_011138 Dact2 Dact2 Zfp36 Zfp36 I79_010741 I79_010741 I79_010700 I79_010700 Eml1 Eml1 C1H12orf29 C1H12orf29 Kitlg Kitlg Gata2 Gata2 Thsd1 Thsd1 Sfrp1 Sfrp1 I79_009740 I79_009740 I79_009596 I79_009596 Batf Batf Fstl3 Fstl3 Plek Plek H671_3g8858 H671_3g8858 Fst Fst Serpinb12 Serpinb12 Adar Adar Ciao3 Ciao3 Agpat5 Agpat5 I79_007532 I79_007532 Ext1 Ext1 Ston2 Ston2 Arl11 Arl11 Hyal2 Hyal2 Zswim9 Zswim9 I79_006254 I79_006254 I79_006225 I79_006225 I79_005672 I79_005672 Wdr7 Wdr7 Armc6 Armc6 Xrcc5 Xrcc5 Pld4 Pld4 Ap3b1 Ap3b1 I79_004478 I79_004478 Sh2b3 Sh2b3 Srsf4 Srsf4 Atf2 Atf2 Slc8a3 Slc8a3 Sin3a Sin3a Dock7 Dock7 H671_1g2300 H671_1g2300 I79_026041 I79_026041 Smpd3 Smpd3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I79_025388Putative methylcytosine dioxygenase TET2. (160 aa)
I79_025342ATP-binding cassette sub-family A member 3. (99 aa)
KitMast/stem cell growth factor receptor. (452 aa)
I79_025176Putative methylcytosine dioxygenase TET2. (113 aa)
PdgfraPlatelet-derived growth factor receptor alpha; Tyrosine-protein kinase that acts as a cell-surface receptor for PDGFA, PDGFB and PDGFC and plays an essential role in the regulation of embryonic development, cell proliferation, survival and chemotaxis. Depending on the context, promotes or inhibits cell proliferation and cell migration. Plays an important role in the differentiation of bone marrow-derived mesenchymal stem cells. Required for normal skeleton development. (1082 aa)
OtoglPhosphotidylinositol phosphatase PTPRQ. (360 aa)
SbdsRibosome maturation protein SBDS. (181 aa)
Mmp21Matrix metalloproteinase-21. (567 aa)
I79_022935Dedicator of cytokinesis protein 1; Belongs to the DOCK family. (782 aa)
I79_022741Putative methylcytosine dioxygenase TET2. (127 aa)
I79_022740Ribosome biogenesis regulatory protein-like. (141 aa)
I79_022034Vascular endothelial growth factor receptor 2; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1150 aa)
Tet2Putative methylcytosine dioxygenase TET2. (273 aa)
Kcnab2Voltage-gated potassium channel subunit beta-2. (331 aa)
I79_021067Keratin, type II cytoskeletal 75; Belongs to the intermediate filament family. (267 aa)
Tmem143Transmembrane protein 143. (249 aa)
Tgfb1Transforming growth factor beta-1. (237 aa)
Slc37a4Glucose-6-phosphate translocase. (285 aa)
I79_020109Glucose-6-phosphate translocase. (141 aa)
RestRE1-silencing transcription factor. (1047 aa)
Rrs1Ribosome biogenesis regulatory protein-like. (422 aa)
Heatr9Armadillo-type fold containing protein. (228 aa)
Lmbr1lProtein LMBR1L; Belongs to the LIMR family. (489 aa)
I79_018801Dedicator of cytokinesis protein 1; Belongs to the DOCK family. (635 aa)
Top2aDNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1526 aa)
Mlf1Myeloid leukemia factor 1. (131 aa)
I79_018561Myeloid leukemia factor 1. (119 aa)
Rbm47RNA-binding protein 47. (89 aa)
Apobec3bPutative DNA dC->dU-editing enzyme APOBEC3. (413 aa)
CebpdCCAAT/enhancer-binding protein. (268 aa)
I79_017613DNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family. (3486 aa)
I79_017561Tyrosine-protein kinase Lyn. (101 aa)
LynTyrosine-protein kinase. (289 aa)
Arhgef7Rho guanine nucleotide exchange factor 7. (646 aa)
SirpaTyrosine-protein phosphatase non-receptor type substrate 1. (522 aa)
I79_017066Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (193 aa)
AnlnActin-binding protein anillin. (1121 aa)
Tent2Poly(A) RNA polymerase GLD2. (484 aa)
I79_016598Ribosome biogenesis regulatory protein-like. (133 aa)
I79_016386Phosphotidylinositol phosphatase PTPRQ. (243 aa)
SrfSerum response factor. (361 aa)
InhbaInhibin beta A chain-like protein. (424 aa)
Psen2Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (448 aa)
I79_014847Homeobox protein MIXL1. (125 aa)
Sp7Transcription factor Sp7. (411 aa)
I79_014810Cyclic AMP-dependent transcription factor ATF-7. (483 aa)
Eef2Elongation factor 2. (872 aa)
I79_013659Macrophage colony-stimulating factor 1 receptor. (595 aa)
I79_012731BAT2 domain-containing protein 1. (2018 aa)
I79_012652TFIIH basal transcription factor complex helicase subunit. (108 aa)
Ercc2TFIIH basal transcription factor complex helicase subunit. (141 aa)
I79_012556Vascular endothelial growth factor receptor 3; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1227 aa)
Runx1Runt-related transcription factor 1. (462 aa)
I79_012384Leukocyte common antigen. (962 aa)
I79_012327N-acetyltransferase ESCO2. (481 aa)
Tal1T-cell acute lymphocytic leukemia protein 1-like. (329 aa)
I79_002587Protein AF-9. (347 aa)
I79_002467Sterile alpha motif domain-containing protein 9-like. (1581 aa)
Samd9lSterile alpha motif domain-containing protein 9-like. (1578 aa)
Samd9Sterile alpha motif domain-containing protein 9. (1581 aa)
Cdk6Cell division protein kinase 6. (273 aa)
NarfNuclear prelamin A recognition factor; Belongs to the NARF family. (331 aa)
I79_002104FL cytokine receptor. (890 aa)
I79_002099Vascular endothelial growth factor receptor 1. (115 aa)
I79_001790Putative 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial. (494 aa)
Gata3Trans-acting T-cell-specific transcription factor GATA-3. (443 aa)
Ptpn6Tyrosine-protein phosphatase non-receptor type 6. (592 aa)
Sp3Transcription factor Sp3. (338 aa)
Jam3Junctional adhesion molecule C. (286 aa)
Lig4DNA ligase. (912 aa)
I79_001001Single-stranded DNA-binding protein 3. (244 aa)
Chd2Chromodomain-helicase-DNA-binding protein 2. (1827 aa)
Pygo1Pygopus-like 1. (385 aa)
Psen1Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (467 aa)
I79_012036Putative E3 ubiquitin-protein ligase HERC6. (66 aa)
Herc6Putative E3 ubiquitin-protein ligase HERC6. (290 aa)
Ptprz1Receptor-type tyrosine-protein phosphatase zeta. (2289 aa)
Dnai4WD repeat-containing protein 78. (707 aa)
I79_011427Protein FAM115C. (564 aa)
I79_011337Protein SLC7A6OS. (104 aa)
Slc7a6osProtein SLC7A6OS. (152 aa)
I79_011333Sphingomyelin phosphodiesterase 3. (410 aa)
Trex1Three prime repair exonuclease 1. (320 aa)
I79_011207DNA repair protein XRCC4. (176 aa)
I79_011138Ribosome biogenesis regulatory protein-like. (222 aa)
Dact2Dapper-like 2. (716 aa)
Zfp36Tristetraproline. (315 aa)
I79_010741Signal-induced proliferation-associated 1-like protein 3. (1218 aa)
I79_010700Transcription factor Sp3. (441 aa)
Eml1Echinoderm microtubule-associated protein-like 1. (184 aa)
C1H12orf29Uncharacterized protein C12orf29-like. (219 aa)
KitlgKit ligand; Ligand for the receptor-type protein-tyrosine kinase KIT. Plays an essential role in the regulation of cell survival and proliferation, hematopoiesis, stem cell maintenance, gametogenesis, mast cell development, migration and function, and in melanogenesis. Belongs to the SCF family. (273 aa)
Gata2Endothelial transcription factor GATA-2. (480 aa)
Thsd1Thrombospondin type-1 domain-containing protein 1. (445 aa)
Sfrp1Secreted frizzled-related protein 1. (104 aa)
I79_009740B-Raf proto-oncogene serine/threonine-protein kinase. (229 aa)
I79_009596G patch domain-containing protein 4. (452 aa)
BatfBasic leucine zipper transcriptional factor ATF-like. (125 aa)
Fstl3Follistatin-related protein 3. (147 aa)
PlekPleckstrin. (327 aa)
H671_3g8858Mas-related G-protein coupled receptor member X1-like protein; Belongs to the G-protein coupled receptor 1 family. (320 aa)
FstFollistatin. (316 aa)
Serpinb12Serpin B12; Belongs to the serpin family. (424 aa)
AdarDouble-stranded RNA-specific adenosine deaminase. (1174 aa)
Ciao3Cytosolic Fe-S cluster assembly factor NARFL; Belongs to the NARF family. (476 aa)
Agpat51-acyl-sn-glycerol-3-phosphate acyltransferase epsilon. (262 aa)
I79_007532Elongation factor 2. (52 aa)
Ext1Exostosin-1. (388 aa)
Ston2Stonin-2; Belongs to the Stoned B family. (1216 aa)
Arl11ADP-ribosylation factor-like protein 11; Belongs to the small GTPase superfamily. Arf family. (176 aa)
Hyal2Hyaluronidase. (359 aa)
Zswim9SWIM-type domain-containing protein. (172 aa)
I79_006254Bone morphogenetic protein 4. (406 aa)
I79_006225Sonic hedgehog protein. (226 aa)
I79_005672Homeobox protein Hox-B3. (174 aa)
Wdr7WD repeat-containing protein 7. (67 aa)
Armc6Armadillo repeat-containing protein 6. (468 aa)
Xrcc5X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (732 aa)
Pld4Phospholipase D4. (297 aa)
Ap3b1AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. (1091 aa)
I79_004478Lysophosphatidic acid phosphatase type 6; Belongs to the histidine acid phosphatase family. (421 aa)
Sh2b3SH2B adapter protein 3. (364 aa)
Srsf4Splicing factor, arginine/serine-rich 4. (368 aa)
Atf2Cyclic AMP-dependent transcription factor ATF-2. (487 aa)
Slc8a3Sodium/calcium exchanger 3; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (922 aa)
Sin3aPaired amphipathic helix protein Sin3a. (1274 aa)
Dock7Dedicator of cytokinesis protein 7; Belongs to the DOCK family. (540 aa)
H671_1g2300Kielin/chordin-like protein. (1223 aa)
I79_026041Zinc finger protein ZFAT. (67 aa)
Smpd3Sphingomyelin phosphodiesterase 3. (446 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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