(18 nodes) Fascia adherens network (Cricetulus griseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Ctnnb1	Catenin beta-1. (781 aa)
	Gja1	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (382 aa)
	I79_025533	Nebulin-related-anchoring protein. (243 aa)
	Nrap	Nebulin-related-anchoring protein. (710 aa)
	Tln2	Talin-2. (2542 aa)
	I79_025021	Nebulin-related-anchoring protein. (545 aa)
	Sptan1	Spectrin alpha chain, brain. (2253 aa)
	Des	Desmin; Belongs to the intermediate filament family. (471 aa)
	I79_020387	Spectrin alpha chain, brain. (215 aa)
	I79_015668	Uncharacterized protein. (115 aa)
	I79_014914	Cadherin-2; Cadherins are calcium-dependent cell adhesion proteins. (756 aa)
	Jup	Junction plakoglobin. (1148 aa)
	Dsp	Desmoplakin. (2836 aa)
	I79_007364	Catenin alpha-3. (100 aa)
	I79_007363	Catenin alpha-1. (93 aa)
	Actn1	Alpha-actinin-1. (903 aa)
	Vcl	Vinculin. (1143 aa)
	Ctnna3	Catenin alpha-3. (95 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Actn1	Ctnna3	G3H1K9	G3H9H8	Alpha-actinin-1.	Catenin alpha-3.	0.925
Actn1	Vcl	G3H1K9	G3GWQ1	Alpha-actinin-1.	Vinculin.	0.992
Ctnna3	Actn1	G3H9H8	G3H1K9	Catenin alpha-3.	Alpha-actinin-1.	0.925
Ctnna3	Ctnnb1	G3H9H8	G3H996	Catenin alpha-3.	Catenin beta-1.	0.975
Ctnna3	Dsp	G3H9H8	G3HD94	Catenin alpha-3.	Desmoplakin.	0.449
Ctnna3	I79_014914	G3H9H8	G3HVC8	Catenin alpha-3.	Cadherin-2; Cadherins are calcium-dependent cell adhesion proteins.	0.463
Ctnna3	Jup	G3H9H8	G3HLU9	Catenin alpha-3.	Junction plakoglobin.	0.852
Ctnna3	Tln2	G3H9H8	G3H510	Catenin alpha-3.	Talin-2.	0.637
Ctnna3	Vcl	G3H9H8	G3GWQ1	Catenin alpha-3.	Vinculin.	0.955
Ctnnb1	Ctnna3	G3H996	G3H9H8	Catenin beta-1.	Catenin alpha-3.	0.975
Ctnnb1	Dsp	G3H996	G3HD94	Catenin beta-1.	Desmoplakin.	0.608
Ctnnb1	Gja1	G3H996	Q80Z93	Catenin beta-1.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.642
Ctnnb1	I79_007363	G3H996	G3HAB6	Catenin beta-1.	Catenin alpha-1.	0.768
Ctnnb1	I79_007364	G3H996	G3HAB7	Catenin beta-1.	Catenin alpha-3.	0.768
Ctnnb1	I79_014914	G3H996	G3HVC8	Catenin beta-1.	Cadherin-2; Cadherins are calcium-dependent cell adhesion proteins.	0.965
Ctnnb1	I79_015668	G3H996	G3HXE6	Catenin beta-1.	Uncharacterized protein.	0.608
Ctnnb1	Jup	G3H996	G3HLU9	Catenin beta-1.	Junction plakoglobin.	0.970
Ctnnb1	Vcl	G3H996	G3GWQ1	Catenin beta-1.	Vinculin.	0.817
Dsp	Ctnna3	G3HD94	G3H9H8	Desmoplakin.	Catenin alpha-3.	0.449
Dsp	Ctnnb1	G3HD94	G3H996	Desmoplakin.	Catenin beta-1.	0.608