STRINGSTRING
Nit2 Nit2 Mdh1 Mdh1 Pck2 Pck2 Got1 Got1 Pck1 Pck1 I79_007263 I79_007263 H671_2g6003 H671_2g6003 I79_020918 I79_020918 PC PC Acly Acly Got2 Got2 I79_011700 I79_011700
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Nit2Omega-amidase NIT2. (276 aa)
Mdh1Malate dehydrogenase. (334 aa)
Pck2Phosphoenolpyruvate carboxykinase [GTP], mitochondrial. (640 aa)
Got1Aspartate aminotransferase. (413 aa)
Pck1Phosphoenolpyruvate carboxykinase, cytosolic [GTP]. (622 aa)
I79_007263Malate dehydrogenase. (271 aa)
H671_2g6003ATP-citrate synthase-like protein. (210 aa)
I79_020918ATP-citrate synthase. (180 aa)
PCPyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1178 aa)
AclyATP-citrate synthase. (59 aa)
Got2Aspartate aminotransferase. (430 aa)
I79_011700ATP-citrate synthase. (697 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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