STRINGSTRING
Lct Lct I79_016240 I79_016240 Map1lc3a Map1lc3a Gpld1 Gpld1 Atg5 Atg5 I79_013257 I79_013257 Becn1 Becn1 I79_010620 I79_010620
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LctDNA helicase; Belongs to the MCM family. (2669 aa)
I79_016240Beclin-1. (119 aa)
Map1lc3aMicrotubule-associated proteins 1A/1B light chain 3A. (278 aa)
Gpld1Phosphatidylinositol-glycan-specific phospholipase D. (778 aa)
Atg5Autophagy protein 5; Involved in autophagic vesicle formation. (147 aa)
I79_013257Cytoplasmic aconitate hydratase. (808 aa)
Becn1Beclin-1. (448 aa)
I79_010620Alpha-synuclein; Belongs to the synuclein family. (166 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.