STRINGSTRING
Snai2 Snai2 I79_017129 I79_017129 I79_017613 I79_017613 Spidr Spidr Ikbip Ikbip I79_017872 I79_017872 Rfwd3 Rfwd3 Hras Hras Rad9a Rad9a Kars1 Kars1 I79_018721 I79_018721 Anxa1 Anxa1 I79_018795 I79_018795 I79_018796 I79_018796 Men1 Men1 Krt14 Krt14 Bak1 Bak1 Ccnd1 Ccnd1 Gata3 Gata3 Net1 Net1 I79_000233 I79_000233 RNF168 RNF168 I79_000761 I79_000761 CgPICR_012052 CgPICR_012052 Lig4 Lig4 CgPICR_003438 CgPICR_003438 I79_001072 I79_001072 I79_001239 I79_001239 I79_001275 I79_001275 Map3k20 Map3k20 Rhno1 Rhno1 Ccnd2 Ccnd2 Tigar Tigar I79_001367 I79_001367 I79_001484 I79_001484 Ercc8 Ercc8 Brat1 Brat1 I79_002013 I79_002013 I79_002347 I79_002347 Fancd2 Fancd2 Rad54l Rad54l Topbp1 Topbp1 Tp53bp1 Tp53bp1 Uimc1 Uimc1 I79_004195 I79_004195 Fam216a Fam216a I79_020102 I79_020102 I79_020287 I79_020287 Nox4 Nox4 Tgfb1 Tgfb1 Lzic Lzic Prap1 Prap1 Polg Polg Nabp1 Nabp1 Ticrr Ticrr Aen Aen I79_021404 I79_021404 Vcam1 Vcam1 Kat5 Kat5 Tmem109 Tmem109 Blm Blm I79_023244 I79_023244 Xrcc6 Xrcc6 I79_024061 I79_024061 I79_024097 I79_024097 I79_024437 I79_024437 I79_025001 I79_025001 Smpd1 Smpd1 I79_025438 I79_025438 I79_025641 I79_025641 Myc Myc Paxip1 Paxip1 Cryab Cryab Mta1 Mta1 Nek1 Nek1 Mfsd11 Mfsd11 I79_004955 I79_004955 Xrcc5 Xrcc5 I79_005151 I79_005151 I79_005573 I79_005573 Msh2 Msh2 Wrn Wrn I79_005867 I79_005867 Ect2 Ect2 I79_006232 I79_006232 Gpx1 Gpx1 Itgb6 Itgb6 Cav1 Cav1 Cop1 Cop1 Sirt1 Sirt1 Ints3 Ints3 I79_007993 I79_007993 Clk2 Clk2 Chek2 Chek2 Zmpste24 Zmpste24 Rhob Rhob Bcl2l1 Bcl2l1 Pml Pml Egr1 Egr1 Stk11 Stk11 I79_009416 I79_009416 Gtf2h5 Gtf2h5 Tlk2 Tlk2 Fignl1 Fignl1 Fbxo4 Fbxo4 Prkaa1 Prkaa1 Polb Polb Sfrp1 Sfrp1 Alad Alad Kdm1a Kdm1a Nipbl Nipbl Cdkn1a Cdkn1a Rad1 Rad1 I79_011207 I79_011207 Trex1 Trex1 Brca1 Brca1 I79_011834 I79_011834 Brca2 Brca2 I79_012384 I79_012384 I79_012568 I79_012568 Mrnip Mrnip H671_21027 H671_21027 Inip Inip I79_012727 I79_012727 I79_012829 I79_012829 Tnks1bp1 Tnks1bp1 Nabp2 Nabp2 Kdm4d Kdm4d I79_013864 I79_013864 Trim13 Trim13 Ddias Ddias Parp1 Parp1 Bard1 Bard1 Sod2 Sod2 I79_015356 I79_015356 Elk1 Elk1 Hus1 Hus1 Rad51 Rad51 Xrcc2 Xrcc2 I79_016307 I79_016307 Mapk14 Mapk14 I79_016810 I79_016810 Rnf4 Rnf4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Snai2Zinc finger protein SNAI2-like protein. (268 aa)
I79_017129TRAF family member-associated NF-kappa-B activator. (427 aa)
I79_017613DNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family. (3486 aa)
SpidrUncharacterized protein KIAA0146. (595 aa)
IkbipInhibitor of nuclear factor kappa-B kinase-interacting protein. (373 aa)
I79_017872RING finger and WD repeat domain-containing protein 3. (105 aa)
Rfwd3RING finger and WD repeat domain-containing protein 3. (641 aa)
HrasGTPase HRas-like protein. (189 aa)
Rad9aCell cycle checkpoint control protein; Belongs to the rad9 family. (392 aa)
Kars1Lysine--tRNA ligase. (626 aa)
I79_018721Elongation factor 1-delta. (332 aa)
Anxa1Annexin. (346 aa)
I79_018795Integrator complex subunit 7. (108 aa)
I79_018796Integrator complex subunit 7. (652 aa)
Men1Menin. (610 aa)
Krt14Keratin, type I cytoskeletal 14; Belongs to the intermediate filament family. (483 aa)
Bak1Bcl-2-likeous antagonist/killer. (209 aa)
Ccnd1G1/S-specific cyclin-D1; Belongs to the cyclin family. (295 aa)
Gata3Trans-acting T-cell-specific transcription factor GATA-3. (443 aa)
Net1Neuroepithelial cell-transforming gene 1 protein. (540 aa)
I79_000233Cytochrome b-245 light chain. (206 aa)
RNF168E3 ubiquitin-protein ligase RNF168; E3 ubiquitin-protein ligase required for accumulation of repair proteins to sites of DNA damage. Acts with UBE2N/UBC13 to amplify the RNF8-dependent histone ubiquitination. Recruited to sites of DNA damage at double-strand breaks (DSBs) by binding to ubiquitinated histone H2A and H2AX and amplifies the RNF8-dependent H2A ubiquitination, promoting the formation of 'Lys-63'-linked ubiquitin conjugates. This leads to concentrate ubiquitinated histones H2A and H2AX at DNA lesions to the threshold required for recruitment of TP53BP1 and BRCA1. Also recrui [...] (564 aa)
I79_000761Non-specific serine/threonine protein kinase; Belongs to the PI3/PI4-kinase family. (1026 aa)
CgPICR_012052Growth factor receptor-bound protein 2. (217 aa)
Lig4DNA ligase. (912 aa)
CgPICR_003438C-C motif chemokine. (143 aa)
I79_001072C-C motif chemokine. (97 aa)
I79_001239Low-density lipoprotein receptor-related protein 2. (4664 aa)
I79_001275Uncharacterized protein. (119 aa)
Map3k20Mitogen-activated protein kinase kinase kinase MLT. (445 aa)
Rhno1Uncharacterized protein C12orf32-like. (245 aa)
Ccnd2G1/S-specific cyclin-D2; Belongs to the cyclin family. (288 aa)
TigarPutative fructose-2,6-bisphosphatase TIGAR. (266 aa)
I79_001367RAD51-associated protein 1. (336 aa)
I79_00148465 kDa Yes-associated protein. (257 aa)
Ercc8DNA excision repair protein ERCC-8. (397 aa)
Brat1HEAT repeat-containing protein C7orf27. (822 aa)
I79_002013BRCA1-A complex subunit BRE. (288 aa)
I79_002347Fanconi anemia group D2 protein-like. (261 aa)
Fancd2Fanconi anemia group D2 protein-like. (1068 aa)
Rad54lDNA repair and recombination protein RAD54-like. (306 aa)
Topbp1DNA topoisomerase II-binding protein 1. (1517 aa)
Tp53bp1Tumor suppressor p53-binding protein 1. (1952 aa)
Uimc1BRCA1-A complex subunit RAP80. (722 aa)
I79_004195Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (501 aa)
Fam216aCell cycle checkpoint control protein RAD9B-like. (231 aa)
I79_020102Histone H2A; Belongs to the histone H2A family. (143 aa)
I79_020287X-ray radiation resistance-associated protein 1. (520 aa)
Nox4NADPH oxidase 4. (130 aa)
Tgfb1Transforming growth factor beta-1. (237 aa)
LzicProtein LZIC. (167 aa)
Prap1Proline-rich acidic protein 1. (148 aa)
PolgDNA polymerase subunit gamma-1. (1215 aa)
Nabp1SOSS complex subunit B2. (198 aa)
TicrrUncharacterized protein C15orf42-like. (1305 aa)
AenApoptosis-enhancing nuclease. (320 aa)
I79_021404Putative DNA helicase INO80 complex-like 1. (1058 aa)
Vcam1Vascular cell adhesion protein 1. (220 aa)
Kat5Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (513 aa)
Tmem109Transmembrane protein 109. (242 aa)
BlmATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (464 aa)
I79_023244Bloom syndrome protein-like. (721 aa)
Xrcc6ATP-dependent DNA helicase 2 subunit 1. (608 aa)
I79_024061Ubiquitin carboxyl-terminal hydrolase 28; Belongs to the peptidase C19 family. (1027 aa)
I79_024097Vascular cell adhesion protein 1. (225 aa)
I79_024437Enterin neuropeptides. (161 aa)
I79_025001Lysine-specific demethylase 4D. (139 aa)
Smpd1Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide. (593 aa)
I79_025438Uncharacterized protein C10orf90. (366 aa)
I79_025641BRCA1-A complex subunit Abraxas. (82 aa)
MycMyc proto-oncogene protein. (281 aa)
Paxip1PAX-interacting protein 1. (91 aa)
CryabAlpha-crystallin B chain; May contribute to the transparency and refractive index of the lens. Has chaperone-like activity, preventing aggregation of various proteins under a wide range of stress conditions. (175 aa)
Mta1Metastasis-associated protein MTA1. (697 aa)
Nek1Serine/threonine-protein kinase Nek1. (1232 aa)
Mfsd11UNC93-like protein MFSD11. (446 aa)
I79_004955Nuclear ubiquitous casein and cyclin-dependent kinases substrate. (173 aa)
Xrcc5X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (732 aa)
I79_005151BRCA1-A complex subunit MERIT40. (362 aa)
I79_005573Secreted frizzled-related protein 2. (268 aa)
Msh2DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (852 aa)
WrnWerner syndrome ATP-dependent helicase-like. (1405 aa)
I79_005867Dynamin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (885 aa)
Ect2Protein ECT2. (881 aa)
I79_006232PAX-interacting protein 1. (79 aa)
Gpx1Glutathione peroxidase; Belongs to the glutathione peroxidase family. (145 aa)
Itgb6Integrin beta; Belongs to the integrin beta chain family. (792 aa)
Cav1Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (147 aa)
Cop1E3 ubiquitin-protein ligase RFWD2. (556 aa)
Sirt1NAD-dependent deacetylase sirtuin-1. (554 aa)
Ints3Integrator complex subunit 3. (1041 aa)
I79_007993Dual specificity protein kinase CLK2. (137 aa)
Clk2Dual specificity protein kinase CLK2. (109 aa)
Chek2Serine/threonine-protein kinase Chk2. (539 aa)
Zmpste24CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (475 aa)
RhobRho-related GTP-binding protein RhoB. (196 aa)
Bcl2l1Bcl-2-like protein 1. (233 aa)
PmlPutative transcription factor PML. (540 aa)
Egr1Early growth response protein; Transcriptional regulator. Recognizes and binds to the DNA sequence 5'-GCG(T/G)GGGCG-3'(EGR-site) in the promoter region of target genes. Binds double-stranded target DNA, irrespective of the cytosine methylation status. Regulates the transcription of numerous target genes, and thereby plays an important role in regulating the response to growth factors, DNA damage, and ischemia. Plays a role in the regulation of cell survival, proliferation and cell death. Belongs to the EGR C2H2-type zinc-finger protein family. (421 aa)
Stk11Serine/threonine-protein kinase 11. (505 aa)
I79_009416Serine-protein kinase ATM. (1640 aa)
Gtf2h5General transcription factor IIH subunit 5. (71 aa)
Tlk2Serine/threonine-protein kinase tousled-like 2. (750 aa)
Fignl1Fidgetin-like protein 1; Belongs to the AAA ATPase family. (677 aa)
Fbxo4F-box only protein 4. (248 aa)
Prkaa1Non-specific serine/threonine protein kinase. (477 aa)
PolbDNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (335 aa)
Sfrp1Secreted frizzled-related protein 1. (104 aa)
AladDelta-aminolevulinic acid dehydratase; Belongs to the ALAD family. (330 aa)
Kdm1aLysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (750 aa)
NipblNipped-B-like protein. (104 aa)
Cdkn1aCyclin-dependent kinase inhibitor 1. (163 aa)
Rad1Cell cycle checkpoint protein RAD1. (279 aa)
I79_011207DNA repair protein XRCC4. (176 aa)
Trex1Three prime repair exonuclease 1. (320 aa)
Brca1Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] (1790 aa)
I79_011834Breast cancer type 2 susceptibility protein-like. (143 aa)
Brca2Breast cancer type 2 susceptibility protein-like. (3008 aa)
I79_012384Leukocyte common antigen. (962 aa)
I79_012568UPF0544 protein C5orf45-like. (154 aa)
MrnipUPF0544 protein C5orf45-like. (195 aa)
H671_21027DNA excision repair protein ERCC-1. (111 aa)
InipSOSS complex subunit C-like protein. (104 aa)
I79_012727Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (441 aa)
I79_012829Histone H2A; Belongs to the histone H2A family. (146 aa)
Tnks1bp1182 kDa tankyrase-1-binding protein. (1693 aa)
Nabp2SOSS complex subunit B1. (211 aa)
Kdm4dLysine-specific demethylase 4D. (324 aa)
I79_013864Lysine-specific demethylase 4D. (160 aa)
Trim13Tripartite motif-containing protein 13. (407 aa)
DdiasNitric oxide-inducible gene protein. (902 aa)
Parp1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (971 aa)
Bard1BRCA1-associated RING domain protein 1. (670 aa)
Sod2Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (176 aa)
I79_015356Heat shock factor protein 1. (524 aa)
Elk1ETS domain-containing protein Elk-1. (425 aa)
Hus1Checkpoint protein; Belongs to the HUS1 family. (281 aa)
Rad51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (339 aa)
Xrcc2DNA repair protein XRCC2. (222 aa)
I79_016307Lys-63-specific deubiquitinase BRCC36-like. (291 aa)
Mapk14Mitogen-activated protein kinase. (349 aa)
I79_016810Serine-protein kinase ATM. (473 aa)
Rnf4RING finger protein 4. (128 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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