STRINGSTRING
Gpld1 Gpld1 LDLR LDLR Tcf7l2 Tcf7l2 Kat5 Kat5 I79_020783 I79_020783 I79_020697 I79_020697 Apoc3 Apoc3 Nr1h2 Nr1h2 Scarb1 Scarb1 Dgat1 Dgat1 I79_015046 I79_015046 Dgat2 Dgat2 I79_012422 I79_012422 Mfsd2a Mfsd2a I79_010155 I79_010155 I79_008173 I79_008173 Slc27a1 Slc27a1 Rgn Rgn Nr1h3 Nr1h3 Ctdnep1 Ctdnep1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Gpld1Phosphatidylinositol-glycan-specific phospholipase D. (778 aa)
LDLRLow-density lipoprotein receptor; Binds LDL, the major cholesterol-carrying lipoprotein of plasma, and transports it into cells by endocytosis. In order to be internalized, the receptor-ligand complexes must first cluster into clathrin-coated pits; Belongs to the LDLR family. (862 aa)
Tcf7l2Transcription factor 7-like 1. (73 aa)
Kat5Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (513 aa)
I79_020783Transcription factor 7-like 2. (451 aa)
I79_020697Glycerol-3-phosphate acyltransferase 1, mitochondrial. (980 aa)
Apoc3Apolipoprotein C-III. (76 aa)
Nr1h2Oxysterols receptor LXR-beta. (445 aa)
Scarb1Scavenger receptor class B member 1; Belongs to the CD36 family. (509 aa)
Dgat1Diacylglycerol O-acyltransferase 1; Belongs to the membrane-bound acyltransferase family. (327 aa)
I79_015046Low-density lipoprotein receptor. (160 aa)
Dgat2Diacylglycerol O-acyltransferase 2. (388 aa)
I79_012422Long-chain-fatty-acid--CoA ligase 5. (171 aa)
Mfsd2aMajor facilitator superfamily domain-containing protein 2. (527 aa)
I79_010155Sterol regulatory element-binding protein 1. (1050 aa)
I79_008173Perilipin; Belongs to the perilipin family. (419 aa)
Slc27a1Long-chain fatty acid transport protein 1. (218 aa)
RgnRegucalcin. (265 aa)
Nr1h3Oxysterols receptor LXR-alpha. (402 aa)
Ctdnep1Serine/threonine-protein phosphatase dullard. (210 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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