STRINGSTRING
Smpd3 Smpd3 I79_022874 I79_022874 Rap1gds1 Rap1gds1 Htr2a Htr2a I79_018131 I79_018131 I79_014629 I79_014629 Acta2 Acta2 I79_011333 I79_011333 I79_010469 I79_010469 I79_010290 I79_010290 I79_008250 I79_008250 I79_007772 I79_007772 Cacna1g Cacna1g Ednra Ednra I79_005088 I79_005088 Edn1 Edn1 Agt Agt Edn3 Edn3 I79_000430 I79_000430 I79_000326 I79_000326 Grip2 Grip2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Smpd3Sphingomyelin phosphodiesterase 3. (446 aa)
I79_022874Amiloride-sensitive sodium channel subunit beta; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (563 aa)
Rap1gds1Rap1 GTPase-GDP dissociation stimulator 1. (429 aa)
Htr2a5-hydroxytryptamine receptor 2A. (264 aa)
I79_0181315-hydroxytryptamine receptor 2A; Belongs to the G-protein coupled receptor 1 family. (237 aa)
I79_014629Sodium/calcium exchanger 1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (369 aa)
Acta2Actin, aortic smooth muscle-like isoform 1. (443 aa)
I79_011333Sphingomyelin phosphodiesterase 3. (410 aa)
I79_010469Bardet-Biedl syndrome 2 protein-like. (594 aa)
I79_010290Endothelin B receptor; Belongs to the G-protein coupled receptor 1 family. (361 aa)
I79_008250Endothelin-2. (137 aa)
I79_007772Voltage-dependent T-type calcium channel subunit alpha-1G. (253 aa)
Cacna1gVoltage-dependent T-type calcium channel subunit alpha-1G. (359 aa)
EdnraEndothelin-1 receptor; Belongs to the G-protein coupled receptor 1 family. (412 aa)
I79_005088Cartilage oligomeric matrix protein. (585 aa)
Edn1Endothelin-1. (202 aa)
AgtAngiotensinogen; Belongs to the serpin family. (477 aa)
Edn3Endothelin-3. (274 aa)
I79_000430McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin. (533 aa)
I79_000326Glutamate receptor-interacting protein 2. (459 aa)
Grip2Glutamate receptor-interacting protein 2. (499 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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