STRINGSTRING
Ankrd63 Ankrd63 I79_021202 I79_021202 Atp6ap1 Atp6ap1 I79_020940 I79_020940 Vti1a Vti1a Caly Caly Rab9b Rab9b Chmp5 Chmp5 I79_020616 I79_020616 I79_020466 I79_020466 Rab6a Rab6a Ap1s2 Ap1s2 Snx6 Snx6 Mylk3 Mylk3 I79_019613 I79_019613 Dctn1 Dctn1 Pdcd1lg2 Pdcd1lg2 Snx12 Snx12 Mybphl Mybphl Tbc1d17 Tbc1d17 Entr1 Entr1 I79_019261 I79_019261 Vps52 Vps52 Ehd1 Ehd1 Rab11b Rab11b EIF3L EIF3L Gga1 Gga1 Ehd3 Ehd3 Chmp4c Chmp4c H671_2g6052 H671_2g6052 I79_018173 I79_018173 I79_018112 I79_018112 Ap5m1 Ap5m1 Eipr1 Eipr1 I79_017699 I79_017699 I79_017698 I79_017698 I79_017375 I79_017375 Rab9a Rab9a Tbc1d10a Tbc1d10a Pheta2 Pheta2 Rab11a Rab11a Vps4a Vps4a Ankrd50 Ankrd50 I79_016548 I79_016548 I79_016372 I79_016372 Washc1 Washc1 I79_016131 I79_016131 I79_016044 I79_016044 Alms1 Alms1 Leprot Leprot Gbf1 Gbf1 Picalm Picalm Zfyve16 Zfyve16 Rab14 Rab14 Vps28 Vps28 I79_015381 I79_015381 I79_015259 I79_015259 Agap2 Agap2 Washc2 Washc2 I79_015020 I79_015020 Snx18 Snx18 I79_014903 I79_014903 Vps26c Vps26c I79_014732 I79_014732 I79_014455 I79_014455 Pikfyve Pikfyve I79_014453 I79_014453 Ube2o Ube2o I79_014247 I79_014247 Vps53 Vps53 Als2cl Als2cl Ankfy1 Ankfy1 Srl Srl I79_013525 I79_013525 I79_013357 I79_013357 Trarg1 Trarg1 Myo5b Myo5b Trim27 Trim27 Snx30 Snx30 I79_012275 I79_012275 I79_012261 I79_012261 Ccdc22 Ccdc22 I79_012144 I79_012144 Chmp1b Chmp1b Tbc1d23 Tbc1d23 Ykt6 Ykt6 Dennd1b Dennd1b Vps25 Vps25 Dennd1a Dennd1a Ptpn23 Ptpn23 I79_011124 I79_011124 I79_011054 I79_011054 Snf8 Snf8 Cltc Cltc Gcc2 Gcc2 Lrrc1 Lrrc1 I79_010622 I79_010622 Rab7a Rab7a Coro1c Coro1c Rassf9 Rassf9 Stam Stam Vps36 Vps36 Spx Spx I79_009893 I79_009893 Dennd2a Dennd2a Snx9 Snx9 Plekhj1 Plekhj1 Ap3d1 Ap3d1 Rnf126 Rnf126 I79_009172 I79_009172 Dpy30 Dpy30 Evi5 Evi5 Btbd8 Btbd8 Bcl2l1 Bcl2l1 I79_008636 I79_008636 Vps4b Vps4b Slc66a2 Slc66a2 Ubxn6 Ubxn6 Rab13 Rab13 Baiap3 Baiap3 Rab11fip3 Rab11fip3 Spag9 Spag9 Rab7b Rab7b Vta1 Vta1 Chmp4b Chmp4b I79_007394 I79_007394 Epg5 Epg5 Ap1s1 Ap1s1 Tbc1d5 Tbc1d5 I79_006855 I79_006855 Erc1 Erc1 Dennd10 Dennd10 Stx6 Stx6 Rhobtb3 Rhobtb3 Vps26a Vps26a Leprotl1 Leprotl1 Ccdc93 Ccdc93 Snx1 Snx1 Rab8b Rab8b H671_1g1639 H671_1g1639 Eps15l1 Eps15l1 Mvb12a Mvb12a Vps16 Vps16 Ap5s1 Ap5s1 I79_004655 I79_004655 Ap3b1 Ap3b1 I79_004465 I79_004465 Vps29 Vps29 Pheta1 Pheta1 Stx12 Stx12 I79_004066 I79_004066 Ehd4 Ehd4 Vps39 Vps39 I79_003804 I79_003804 I79_003715 I79_003715 Snx33 Snx33 I79_003452 I79_003452 Vamp4 Vamp4 I79_003223 I79_003223 I79_003101 I79_003101 Arhgap1 Arhgap1 I79_002666 I79_002666 Snx17 Snx17 Itsn2 Itsn2 CgPICR_012593 CgPICR_012593 Snx3 Snx3 Vps50 Vps50 Hgs Hgs Chmp6 Chmp6 Stx16 Stx16 Clec16a Clec16a Nsg1 Nsg1 Htt Htt Reps1 Reps1 Zfyve9 Zfyve9 Eps15 Eps15 Snx5 Snx5 I79_001701 I79_001701 Snx8 Snx8 Ap5z1 Ap5z1 Prepl Prepl Chmp7 Chmp7 I79_001239 I79_001239 Rab35 Rab35 Abca1 Abca1 Vps26b Vps26b I79_001050 I79_001050 Gga3 Gga3 Itsn1 Itsn1 Tmem50b Tmem50b Xxylt1 Xxylt1 Rbsn Rbsn I79_000326 I79_000326 Grip2 Grip2 Chmp1a Chmp1a I79_025972 I79_025972 Tbc1d10b Tbc1d10b Arf6 Arf6 Bet1l Bet1l Arl4c Arl4c Rilp Rilp Heatr5a Heatr5a Vps51 Vps51 Stx5 Stx5 H671_3g8566 H671_3g8566 I79_023329 I79_023329 Snx27 Snx27 Dennd5a Dennd5a I79_022302 I79_022302 I79_022295 I79_022295 H671_1g2680 H671_1g2680 Ap5b1 Ap5b1 Chmp2b Chmp2b Vps35l Vps35l Lmtk2 Lmtk2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ankrd63Uncharacterized protein. (124 aa)
I79_021202MHD domain-containing death-inducing protein. (253 aa)
Atp6ap1V-type proton ATPase subunit S1. (441 aa)
I79_020940Uncharacterized protein KIAA1109. (2865 aa)
Vti1aVesicle transport through interaction with t-SNAREs-like 1A. (219 aa)
CalyNeuron-specific vesicular protein calcyon. (228 aa)
Rab9bRas-related protein Rab-9B. (197 aa)
Chmp5Charged multivesicular body protein 5. (160 aa)
I79_020616Charged multivesicular body protein 5. (85 aa)
I79_020466Neuron-specific protein family member 2. (123 aa)
Rab6aRas-related protein Rab-6A. (108 aa)
Ap1s2AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (154 aa)
Snx6Sorting nexin-6. (380 aa)
Mylk3Vacuolar protein sorting-associated protein 35. (1427 aa)
I79_019613Dynactin subunit 1. (163 aa)
Dctn1Dynactin subunit 1. (559 aa)
Pdcd1lg2Protein RIC1-like. (1446 aa)
Snx12Sorting nexin-12. (162 aa)
MybphlProteasome endopeptidase complex. (1190 aa)
Tbc1d17TBC1 domain family member 17. (673 aa)
Entr1Serologically defined colon cancer antigen 3-like. (89 aa)
I79_019261ADP-ribosylation factor-like protein 1. (72 aa)
Vps52Vacuolar protein sorting-associated protein 52-like. (471 aa)
Ehd1EH domain-containing protein 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (398 aa)
Rab11bRas-related protein Rab-11B. (218 aa)
EIF3LEukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (1354 aa)
Gga1ADP-ribosylation factor-binding protein GGA1. (430 aa)
Ehd3EH domain-containing protein 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (535 aa)
Chmp4cCharged multivesicular body protein 4c. (232 aa)
H671_2g6052ADP-ribosylation factor-related protein 1. (140 aa)
I79_018173Carabin. (446 aa)
I79_018112Lysosomal-trafficking regulator. (3383 aa)
Ap5m1MHD domain-containing death-inducing protein; Belongs to the adaptor complexes medium subunit family. (244 aa)
Eipr1Protein TSSC1. (386 aa)
I79_017699Charged multivesicular body protein 2a. (72 aa)
I79_017698Charged multivesicular body protein 2a. (51 aa)
I79_017375RalBP1-associated Eps domain-containing protein 2. (425 aa)
Rab9aRas-related protein Rab-9A. (201 aa)
Tbc1d10aTBC1 domain family member 10A. (272 aa)
Pheta2Protein FAM109B. (259 aa)
Rab11aRas-related protein Rab-11A. (216 aa)
Vps4aVacuolar protein sorting-associated protein 4A; Belongs to the AAA ATPase family. (437 aa)
Ankrd50Ankyrin repeat domain-containing protein 50. (1416 aa)
I79_016548UPF0681 protein KIAA1033. (645 aa)
I79_016372MAGE-like protein 2. (1093 aa)
Washc1WAS protein family-like 1. (497 aa)
I79_016131Charged multivesicular body protein 6. (186 aa)
I79_016044Alstrom syndrome protein 1-like. (276 aa)
Alms1Alstrom syndrome protein 1-like. (327 aa)
LeprotLeptin receptor gene-related protein. (131 aa)
Gbf1Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1. (1857 aa)
PicalmPhosphatidylinositol-binding clathrin assembly protein. (604 aa)
Zfyve16Zinc finger FYVE domain-containing protein. (1523 aa)
Rab14Ras-related protein Rab-14. (215 aa)
Vps28Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (221 aa)
I79_015381Protein scribble-like. (789 aa)
I79_015259Charged multivesicular body protein 1b-2. (196 aa)
Agap2Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2. (829 aa)
Washc2Protein FAM21. (1316 aa)
I79_015020Transmembrane and coiled-coil domains protein 1. (649 aa)
Snx18Sorting nexin-18. (333 aa)
I79_014903Small G protein signaling modulator 2. (1005 aa)
Vps26cDown syndrome critical region protein 3-like. (278 aa)
I79_014732HEAT repeat-containing protein 5B. (1644 aa)
I79_0144551-phosphatidylinositol-3-phosphate 5-kinase. (306 aa)
Pikfyve1-phosphatidylinositol-3-phosphate 5-kinase. (377 aa)
I79_0144531-phosphatidylinositol-3-phosphate 5-kinase. (266 aa)
Ube2oUbiquitin-conjugating enzyme E2 O. (1138 aa)
I79_014247Uncharacterized protein KIAA1109. (1117 aa)
Vps53Vacuolar protein sorting-associated protein 53-like. (832 aa)
Als2clVPS9 domain-containing protein. (952 aa)
Ankfy1Ankyrin repeat and FYVE domain-containing protein 1. (572 aa)
SrlSarcalumenin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (935 aa)
I79_013525Biogenesis of lysosome-related organelles complex 1 subunit 1. (154 aa)
I79_013357Golgi SNAP receptor complex member 1. (202 aa)
Trarg1Tumor suppressor candidate 5-like. (177 aa)
Myo5bMyosin-Vb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2009 aa)
Trim27Zinc finger protein RFP. (402 aa)
Snx30Sorting nexin-30. (405 aa)
I79_012275Wiskott-Aldrich syndrome protein-like. (315 aa)
I79_012261GRIP1-associated protein 1. (1014 aa)
Ccdc22Coiled-coil domain-containing protein 22. (606 aa)
I79_012144Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family. (2171 aa)
Chmp1bCharged multivesicular body protein 1b. (196 aa)
Tbc1d23TBC1 domain family member 23. (83 aa)
Ykt6Synaptobrevin-like YKT6; Belongs to the synaptobrevin family. (191 aa)
Dennd1bDENN domain-containing protein 1A. (413 aa)
Vps25Vacuolar protein-sorting-associated protein 25. (176 aa)
Dennd1aDENN domain-containing protein 1A. (887 aa)
Ptpn23Tyrosine-protein phosphatase non-receptor type 23. (1639 aa)
I79_011124Sorting nexin-2. (386 aa)
I79_011054Lysosomal-associated transmembrane protein 4B. (106 aa)
Snf8Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (258 aa)
CltcClathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1960 aa)
Gcc2GRIP and coiled-coil domain-containing protein 2. (1681 aa)
Lrrc1Leucine-rich repeat-containing protein 1. (167 aa)
I79_010622Leucine-rich repeat-containing protein 1. (119 aa)
Rab7aRas-related protein Rab-7a. (207 aa)
Coro1cCoronin; Belongs to the WD repeat coronin family. (474 aa)
Rassf9Ras association domain-containing protein 9. (414 aa)
StamSignal transducing adapter molecule 1. (132 aa)
Vps36Vacuolar protein-sorting-associated protein 36. (354 aa)
SpxVesicle transport protein GOT1B. (240 aa)
I79_009893ADP-ribosylation factor-related protein 1. (201 aa)
Dennd2aDENN domain-containing protein 2A. (1006 aa)
Snx9Sorting nexin. (587 aa)
Plekhj1Pleckstrin-likey domain-containing family J member 1. (70 aa)
Ap3d1AP-3 complex subunit delta-1. (1199 aa)
Rnf126RING finger protein 126. (135 aa)
I79_009172Ankyrin repeat domain-containing protein 27. (845 aa)
Dpy30Protein dpy-30-like. (99 aa)
Evi5EVI5-like protein. (825 aa)
Btbd8Uncharacterized protein KIAA1107. (1172 aa)
Bcl2l1Bcl-2-like protein 1. (233 aa)
I79_008636Vacuolar protein sorting-associated protein 54. (393 aa)
Vps4bVacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family. (436 aa)
Slc66a2PQ-loop repeat-containing protein 1. (271 aa)
Ubxn6UBX domain-containing protein 6. (442 aa)
Rab13Ras-related protein Rab-13. (199 aa)
Baiap3BAI1-associated protein 3. (1140 aa)
Rab11fip3Rab11 family-interacting protein 3. (1228 aa)
Spag9C-jun-amino-terminal kinase-interacting protein 4. (1155 aa)
Rab7bRas-related protein Rab-7b. (199 aa)
Vta1Vacuolar protein sorting-associated protein VTA1-like. (306 aa)
Chmp4bCharged multivesicular body protein 4b. (190 aa)
I79_007394UPF0493 protein KIAA1632. (148 aa)
Epg5UPF0493 protein KIAA1632. (522 aa)
Ap1s1AP-1 complex subunit sigma-1A. (185 aa)
Tbc1d5TBC1 domain family member 5. (820 aa)
I79_006855Periodic tryptophan protein 2-like. (1940 aa)
Erc1ELKS/RAB6-interacting/CAST family member 1. (1116 aa)
Dennd10Protein FAM45. (345 aa)
Stx6Syntaxin-6; Belongs to the syntaxin family. (262 aa)
Rhobtb3Rho-related BTB domain-containing protein 3. (611 aa)
Vps26aVacuolar protein sorting-associated protein 26A. (327 aa)
Leprotl1Leptin receptor overlapping transcript-like 1. (131 aa)
Ccdc93Coiled-coil domain-containing protein 93. (627 aa)
Snx1Sorting nexin-1. (522 aa)
Rab8bRas-related protein Rab-8B-like protein. (207 aa)
H671_1g1639Ras-related protein Rab-8A-like protein. (236 aa)
Eps15l1Epidermal growth factor receptor substrate 15-like 1. (755 aa)
Mvb12aMultivesicular body subunit 12A-like protein. (271 aa)
Vps16Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. (839 aa)
Ap5s1AP5S1. (200 aa)
I79_004655ADP-ribosylation factor-like protein 8B. (210 aa)
Ap3b1AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. (1091 aa)
I79_004465CKLF-like MARVEL transmembrane domain-containing protein 6. (104 aa)
Vps29Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. (183 aa)
Pheta1Protein FAM109A. (236 aa)
Stx12Syntaxin-12; Belongs to the syntaxin family. (274 aa)
I79_004066Vesicle transport through interaction with t-SNAREs-like 1B. (326 aa)
Ehd4EH domain-containing protein 4; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (628 aa)
Vps39Vam6/Vps39-like protein. (507 aa)
I79_003804Vam6/Vps39-like protein. (156 aa)
I79_003715Transmembrane protein 50A. (109 aa)
Snx33Sorting nexin. (574 aa)
I79_003452Fibulin-7. (766 aa)
Vamp4Vesicle-associated membrane protein 4. (141 aa)
I79_003223Ras-related protein Rab-6B. (140 aa)
I79_003101Rho GTPase-activating protein RICH2. (533 aa)
Arhgap1Rho GTPase-activating protein 1. (439 aa)
I79_002666Glutamate receptor-interacting protein 1. (898 aa)
Snx17Sorting nexin-17. (470 aa)
Itsn2Intersectin-2. (1652 aa)
CgPICR_012593Charged multivesicular body protein 5. (131 aa)
Snx3Sorting nexin-3. (118 aa)
Vps50Coiled-coil domain-containing protein 132. (964 aa)
HgsHepatocyte growth factor-regulated tyrosine kinase substrate; Involved in intracellular signal transduction mediated by cytokines and growth factors. When associated with STAM, it suppresses DNA signaling upon stimulation by IL-2 and GM-CSF. Could be a direct effector of PI3-kinase in vesicular pathway via early endosomes and may regulate trafficking to early and late endosomes by recruiting clathrin. May concentrate ubiquitinated receptors within clathrin- coated regions. Involved in down-regulation of receptor tyrosine kinase via multivesicular body (MVBs) when complexed with STAM (E [...] (776 aa)
Chmp6Charged multivesicular body protein 6. (176 aa)
Stx16Syntaxin-16; Belongs to the syntaxin family. (326 aa)
Clec16aProtein CLEC16A. (1048 aa)
Nsg1Neuron-specific protein family member 1. (185 aa)
HttHuntingtin protein. (2928 aa)
Reps1RalBP1-associated Eps domain-containing protein 1. (744 aa)
Zfyve9Zinc finger FYVE domain-containing protein. (1413 aa)
Eps15Epidermal growth factor receptor substrate 15. (74 aa)
Snx5Sorting nexin-5. (289 aa)
I79_001701MICAL-like protein 2. (912 aa)
Snx8Sorting nexin-8. (414 aa)
Ap5z1Uncharacterized protein KIAA0415. (769 aa)
PreplProlyl endopeptidase-like. (721 aa)
Chmp7Charged multivesicular body protein 7. (449 aa)
I79_001239Low-density lipoprotein receptor-related protein 2. (4664 aa)
Rab35Ras-related protein Rab-35. (173 aa)
Abca1ATP-binding cassette sub-family A member 1. (2261 aa)
Vps26bVacuolar protein sorting-associated protein 26B. (336 aa)
I79_001050Rab11 family-interacting protein 4. (560 aa)
Gga3ADP-ribosylation factor-binding protein GGA3. (685 aa)
Itsn1Intersectin-1. (1213 aa)
Tmem50bTransmembrane protein 50B. (151 aa)
Xxylt1Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2. (852 aa)
RbsnRabenosyn-5. (779 aa)
I79_000326Glutamate receptor-interacting protein 2. (459 aa)
Grip2Glutamate receptor-interacting protein 2. (499 aa)
Chmp1aCharged multivesicular body protein 1a. (196 aa)
I79_025972Hepatocyte growth factor-regulated tyrosine kinase substrate. (147 aa)
Tbc1d10bTBC1 domain family member 10B. (391 aa)
Arf6ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. (175 aa)
Bet1lBET1-like protein. (192 aa)
Arl4cADP-ribosylation factor-like protein 4C; Belongs to the small GTPase superfamily. Arf family. (192 aa)
RilpRab-interacting lysosomal protein. (368 aa)
Heatr5aHEAT repeat-containing protein 5A. (168 aa)
Vps51Protein fat-free-like. (595 aa)
Stx5Syntaxin-5; Belongs to the syntaxin family. (170 aa)
H671_3g8566Ragulator complex protein LAMTOR1-like protein. (236 aa)
I79_023329Syntaxin-5. (144 aa)
Snx27Sorting nexin-27. (232 aa)
Dennd5aDENN domain-containing protein 5A. (1245 aa)
I79_022302Transmembrane protein 50A. (69 aa)
I79_022295Dynamin-1-like protein. (310 aa)
H671_1g2680Sorting nexin-7. (381 aa)
Ap5b1AP5B1. (913 aa)
Chmp2bCharged multivesicular body protein 2b. (202 aa)
Vps35lUPF0505 protein C16orf62-like. (1006 aa)
Lmtk2Serine/threonine-protein kinase LMTK2. (1436 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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